Agrobacterium vitis VAR03-1: RvVAR031_33640
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Entry
RvVAR031_33640 CDS
T08810
Symbol
glcF
Name
(GenBank) glycolate oxidase iron-sulfur subunit
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00630
Glyoxylate and dicarboxylate metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RvVAR031_33640 (glcF)
Enzymes [BR:
avf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
RvVAR031_33640 (glcF)
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Gene cluster
GFIT
Motif
Pfam:
CCG
Fer4_8
Fer4_17
Fer4_7
Fer4_10
Fer4_16
Fer4_6
Fer4_20
Fer4_2
Fer4_9
Fer4_4
Fer4
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
BCH55754
LinkDB
All DBs
Position
2:106012..107325
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AA seq
437 aa
AA seq
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MQTNFTLAQLADPKTAEAESILRRCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLE
NGRAADEEIVTHIDRCLSCLACTTTCPSGVDYMHLVDHARNHIENTYKRPLADRLLRKML
AAVLPYPGRMRVALAFARLGRPFAPLMERIAGLQPMAAMLRLAPQDVPYPSPISRPGLHS
ARGNRKGRVALLTGCAQSVLDPGINDATVALLTRLGIEVVVPKGEGCCGALVHHMGRETD
ALAAARRTIDAWMVEIGSGETSGLDAIVITTSGCGTTIKDYGHMLRHDPVYSAKAARVSA
LAKDVSEYLATLDLQQQADKGVTVAYHSACSLQHGQKITALPKLLLKTAGFTVRDPAEGH
LCCGSAGTYNILQPEISQQLKARKLRNIQAVNPDVIAAGNIGCMTQIGSGTDIPVVHTVE
LLNWAFGGEKPQKLKDL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaatttcacgctggcccaacttgccgatccaaaaaccgccgaagccgagagc
attctgcgccgctgcgtgcattgcggcttctgcaccgcgacctgtcccacatatgtcacg
cttggcaatgagttggacagtccgcgcgggcggatctacctgatcaaggatatgctggaa
aacgggcgggcggcggatgaggaaatcgtcacgcacattgaccgatgcctgtcctgtctg
gcctgtacgacgacctgtccctccggtgtcgattacatgcatctggtcgaccatgcccgc
aaccatatcgaaaatacctataagaggccgctggccgaccggttgctccgcaagatgctg
gcagcggtgctgccctatccggggcgtatgcgggtggcgctggcctttgcccggctcgga
cgaccgtttgcgccgctgatggagcgcattgccggattgcagccgatggcggcgatgttg
cgactggcacctcaggatgtgccttatccatcgcccatctcacgtccgggtttgcattcg
gcgcggggcaatcgcaaaggccgggtggcgctgctgaccggctgcgctcagtcggtgctc
gatcccggtatcaatgacgcgactgttgcgcttctgacccggttgggtatcgaggtcgtt
gttcccaagggggagggctgctgcggggcgctggtgcatcacatggggcgtgagacggat
gcgcttgccgcagcccggcgtactattgatgcctggatggtggagatcgggtcgggtgag
acaagcggtctggatgccatcgttatcaccacatccggctgtggcaccaccatcaaggat
tatggccatatgctgcgccacgatccggtctatagcgccaaggcagcacgggtttcagcg
cttgccaaggacgtaagcgagtacctcgccactctggatctacaacagcaggcggataag
ggcgtgactgttgcctatcattccgcctgttcgctgcaacacggccagaagataacggcc
ctgccgaaattactgctgaaaacggctggctttactgtccgcgatccggcggaagggcat
ttatgctgtggctcggccggaacctataatattctccagccggaaatttcgcagcaattg
aaagcccgcaagttgcgcaacatccaggcggtcaatccggatgtcatcgctgctggtaat
attggctgtatgacccagatcggttcgggaacagacatccctgtcgtccacactgtcgaa
ttgctcaactgggcgtttggcggagaaaaaccccagaaattaaaggatttataa
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