Agrobacterium vitis VAR03-1: RvVAR031_34690
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Entry
RvVAR031_34690 CDS
T08810
Symbol
bexD
Name
(GenBank) capsule polysaccharide transporter
KO
K01991
polysaccharide biosynthesis/export protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_34690 (bexD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_34690 (bexD)
Transporters [BR:
avf02000
]
Other transporters
Pores ion channels [TC:
1
]
RvVAR031_34690 (bexD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
Motif
Other DBs
NCBI-ProteinID:
BCH55859
LinkDB
All DBs
Position
2:226320..227462
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AA seq
380 aa
AA seq
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MRKVLPVLLIAILSSCAKPSDGPSAGAIRSATFPGSSSKVPVIELSKAPAVTAVAPQSGY
SASDPGLSVLRGAYNQQRLRPGDVFDVTLLDTGEEGLFSSTHSSTLNLGRFTVDPQGSVT
MPFVGKQRVTDSTPEGLQNRIVQGMKGSAVNPQAVVTVVDKPSSAVLVSGGVKTPGKVAL
TARRERVLDIISQSGGASVAPQAAKVTVVRGRERATTTLDRVMSDEKQNIVLLPGDQVIV
DGEPASYTALGAFKSTGEFQFETGKLTLAQAVGRAGGLLDDRADARNVYVFRNQLIQVPA
STVTASGTKGPVTMTTSSKPVIYHVNMKDASSIMLMQLFQMQKGDVLYASNSGMVDAAKL
LTVYQKVPSTSAAPLPGSSN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggttttgccagttcttttaattgcgattttgtcgagctgtgcaaaaccatcg
gatggaccaagtgctggggccatccggtctgcgacgttcccgggcagttcaagcaaagtg
ccggtgatcgaactttccaaggctccggcggtcacggctgtggcgccgcagtcgggttat
tcggcctcagatccgggcttgtcggtgcttcgtggcgcctataatcaacagagactgcga
ccgggcgatgtgtttgacgtgaccttgctggacaccggcgaagaagggctgttttcctcc
acccatagcagtacccttaatcttggtcgcttcactgtcgatcctcaaggcagtgttacc
atgcccttcgttggcaagcagcgggtgacggattccaccccggaaggcctacaaaatcgt
atcgtccagggtatgaaaggttcggcggttaacccacaggccgtcgtgacggttgtggac
aaaccgtccagcgccgttctggtcagcggtggcgtcaagacccccggaaaagtggcgctg
acagcgcggcgtgagcgggttctggatatcatttcgcagtcaggcggggcgtctgtcgcg
ccgcaggccgccaaggttaccgtcgtgcgtggtcgtgaacgtgcgaccacgacgctggat
cgggtgatgagcgatgaaaagcagaatatcgtcctgctgcccggcgaccaggtgatcgtt
gatggcgaaccggccagctatacggccctcggcgctttcaaaagcacgggtgaattccag
ttcgaaaccggcaagctcaccctggctcaggcggttggccgggctggcggattgctggat
gaccgggccgatgcccgcaatgtctacgtgttccgcaaccagttgatccaggttcctgca
tcgacggtgacggcaagtggcaccaagggaccggtcaccatgaccaccagcagcaagcct
gtaatctatcatgttaatatgaaggacgcctccagcatcatgctgatgcagctgttccag
atgcagaagggcgatgtgctctatgctagcaattcgggcatggttgatgccgccaagttg
ctgaccgtttaccagaaagtgccgtcaacatctgcggcaccgctccccggctcctccaat
tga
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