Agrobacterium vitis VAR03-1: RvVAR031_34840 Help Entry RvVAR031_34840    CDS       T08810                                  Symbol clpB Name (GenBank) ClpV1 family T6SS ATPase   KO K11907   type VI secretion system protein VasG Organism avf  Agrobacterium vitis VAR03-1 Pathway avf03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:avf00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     RvVAR031_34840 (clpB)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:avf02044]     RvVAR031_34840 (clpB) Secretion system [BR:avf02044]  Type VI secretion system   Imp/Vas secretion system core components    RvVAR031_34840 (clpB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 Sigma54_activat AAA_22 Clp_N NACHT TniB Zeta_toxin nSTAND3 AAA_25 AAA_7 IstB_IS21 SRP54 SLFN-g3_helicase Cep57_MT_bd Torsin NBD_SMAX1 DUF815 Motif Other DBs NCBI-ProteinID:  BCH55874 LinkDB All DBs Position 2:246696..249395 Genome browser AA seq 899 aa AA seqDB search MSHIDLNRLIESLEPDLRVALETAASTAAGRGHGQVDIAHLLGAVIDAASFQPVLEQLGL PIAALRREVGDALDDTVVAGSGQLALSQNILTLGREAWICASLQSGRSAVTLADIFAAMD DEPSLRTLTRGRFPSLRMLDRTALQTLLQADTIAETPKSSLSPASAREDEFLRLYTHDLT EDARAGRLDPVVGRDGELRQMIDILLRRRQNNPILVGEAGVGKTAVAEALALEIAAGRVP EKLQSVRLLMLDLTLLQAGAGVKGEFERRLTGVIEAVKRSPEPIILFIDEAHGLIGAGGA SGQGDAANILKPALARGEVRTIAATTWSEYKKYFEKDAALTRRFQPVHVREPDEETAIRM LRGIAGTFMTHHGVKIRDEAIVAAVQLSARFLPARQLPDKAVSLIDTAAATVSLARQTAP EQLLLMKSELSHLTVETDWLAREPESTDVLERRQAVAAEMERLTKEIESLQARYDAEIAA LAASDEAVPADNDISAPENAPDVNITPLRTRGLARRAASLAPTSAGEEKLVPHEVDRNVV AAVLARWTGIPLGKLLADQIESAKSLDTRLKEKVIGQDAALERIGDAMRAARAGLSDPRR PPAVFMLVGMSGTGKTETALTLADLMYGGSQHLTTINMSEFKEEHKVSMLLGAPPGYVGY GEGGVLTEAVRRRPYGVLLLDEIDKAHPGVQDIFYQVFDKGMLRDGEGRDVDFRNTTIFM TANTGSELLASLALDPETMPEGEALEALLMPELQKQFKPAFLGRTVLLPFMPLGKDALSQ IVDIQIDRIRERIFSAYGTELVLSEEARNALIGRAVASEIGARAIEIMIGRDLLPPLSSF FLELVASGGKVTDAQVTHDEKGFGVRAGAAGGNEEFVDAFGLSMDKDAASEGVSRRMRQ NT seq 2700 nt NT seq  +upstreamnt  +downstreamnt atgtcgcatattgacctcaatcgattgatcgaatcgcttgagcctgatttgcgtgtcgcg cttgagacggctgcatccacagcagccgggcgcggacacggacaagttgatattgcccat ctgcttggcgcagttatagatgcggcgtcatttcagccggtgctggagcaactgggcttg cccattgcagcgcttcgccgcgaggttggtgatgcgcttgatgacacggttgtggccggt tccggccagctcgctctatcgcagaacattctgaccctcggacgtgaagcttggatctgt gcttctctccagtctgggcggagcgcagttacacttgccgatatatttgcggccatggat gatgaaccgtctctgcgcactttgacccgtggccgtttcccgtcgctgcgcatgctggac cggacagcactgcaaacgcttttgcaggcggacaccatagcggagaccccgaaatcgtcg ttgtctccggcatccgcccgtgaagacgagttcctgcgcctctatacgcatgatctcacc gaggatgcgcgggcaggccggcttgatccggtcgttggccgtgatggtgagcttcgccag atgatcgacatcttgttgcgcaggcgacagaataatccgatcctggtcggtgaggcaggc gttggcaagacagcggtggccgaagcgctggcgctggagattgccgccggccgcgtgccg gaaaaattgcaatccgtacggctgctgatgctcgatctgactttgttgcaggccggcgct ggcgtgaagggtgagttcgaacggcgattaaccggcgttatcgaagcggtgaaacgctcg ccggaacctatcatcctgtttattgatgaggcgcatggtctgatcggtgctggtggggca agcgggcagggcgatgcagccaatattctcaagccagcgctggcgcgtggcgaagtgcgc accatcgctgccaccacctggagcgagtacaagaagtatttcgaaaaagacgcggcactg acccgccgcttccagcccgtccatgtgcgtgagccggacgaggaaaccgcaatccgcatg cttcgcggcattgctgggaccttcatgacccatcacggggtgaaaatccgtgacgaggct atcgttgctgccgtgcaactgtctgcccgcttcctgccggctcgccaattgcctgacaaa gccgtgagcctgatcgataccgccgcagccacggtgtcgctggcgcgccagacagcgccg gaacagttgctgcttatgaaaagcgaactttcgcatctcaccgtcgagactgactggctt gcccgtgagccggaaagtacggatgtgttggagcgcaggcaggccgtcgccgctgaaatg gagcgcttgacgaaggaaatcgagagccttcaagcgcgctatgacgctgaaattgcagcg cttgcagcgagtgatgaagcagttcctgcggacaatgatattagcgcgcctgaaaatgct ccggatgtcaatatcacccccttgcggacacgtgggcttgcccgccgcgcggcgtcgctg gcgccgacttccgctggcgaggaaaagcttgtgccgcatgaggtggaccgcaatgtggtt gcggccgtcttggcacggtggaccggcattcctctcggcaaattgctggccgatcagatc gaaagcgcaaaaagcctcgataccaggttgaaggaaaaggtgatcggtcaggatgcagcg ctggaacggattggcgacgccatgcgtgcggcgcgcgccgggctttccgatccgcgccgc ccgcctgctgtgttcatgctggtgggcatgtcgggaaccggcaagaccgaaaccgcgcta accctggctgacctgatgtatggtggtagccagcatctgacgacgatcaacatgtcggaa ttcaaggaagagcacaaagtatccatgctgttgggtgctcctccgggctatgtcggctat ggcgaaggtggtgtgctgacagaagccgtgcggcgtcgtccctatggcgtgctgttgctg gacgaaatcgacaaggcgcatcccggcgtccaggacattttctatcaggtgttcgacaag ggaatgttgcgcgatggcgaaggccgcgatgtcgacttccgcaataccactattttcatg acggccaataccggttccgaattactggcctctctggcccttgatccggaaaccatgccc gaaggcgaggcgttggaagcgctgctgatgccggagctgcaaaaacagttcaagccagcc ttccttggacgcacggtgcttttgcccttcatgccgcttggcaaggatgcgctgtcgcag atcgtcgatatccagattgaccgcattcgggagcgtattttttcggcctatggcacagag cttgttctgtccgaagaggcccgcaacgcgctgatcggtcgcgccgttgcaagtgagatc ggagcccgcgccatcgaaatcatgattggccgggatctgttgccgccgctttccagcttc ttccttgagctggtcgcatccggcggaaaggttaccgacgctcaggtgacccatgatgaa aaagggttcggcgttcgcgccggggccgctgggggaaacgaggaattcgtcgatgccttt ggtctatcgatggataaggatgccgcgtcggaaggggtatccagacgcatgcggcagtga

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