Agrobacterium vitis VAR03-1: RvVAR031_35060
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Entry
RvVAR031_35060 CDS
T08810
Name
(GenBank) histidine kinase
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_35060
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
avf01001
]
RvVAR031_35060
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
avf02022
]
RvVAR031_35060
Enzymes [BR:
avf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RvVAR031_35060
Protein kinases [BR:
avf01001
]
Histidine kinases
OmpR family
RvVAR031_35060
Two-component system [BR:
avf02022
]
OmpR family
KdpD-KdpE (potassium transport)
RvVAR031_35060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
HATPase_c
DUF4118
HisKA
Usp
HATPase_c_2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BCH55896
UniProt:
A0A6S6MWJ5
LinkDB
All DBs
Position
2:complement(267396..270104)
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AA seq
902 aa
AA seq
DB search
MSDAQRDTNRRPDPDALLGLANRDGRGKLTIFLGAAPGVGKTYAMLSRARGQKTAGIDIV
IGLVETHGRSETELLTEGLEILPRKQISYKDRVLEEFDIDAALVRRPAIIIVDELAHSNV
PESRHPKRHQDIEELLAAGIDVWTALNIQHLESLSEIVTQITGVQVRETVPDRVLKQADV
VVLIDLPPEELIVRLREGKIYLPDNARRATDSFFRLGNLTALRELALRRTADRVDDQMVD
YLKQNAIEGPWRTGERLLVCIGPDALSEKVVRTASNLASGMNARWLVVSLEQADQADENP
NDQTRIEELFRLAERFGAETRRVQGRDFVHEILRLAKKEHVTQIVIGAPQRSRWQKLFRH
SLPDALLEVRSGMGIHLITGEAAPDTVKRVQRNKAFSLKTLPVRPRDIITALVTTTVAAI
GARGIIEFVALPNVSMLFLLAVLVSALREGYVAAVLTSVLSALAYNFFFISPVFTLTIAA
PHEVFAFVMFIAAALIAGGIAARIRAQGQIAARRATQTQILYDVSSKLAGTVDADGVVWT
AVSQLNGIIKRPVALLSSQNGTLTLRSCWPPDTELGVAEMAAARFALEKGEAAGAGTGTL
PNSKLQFRPLRSPAGTLAVCGHEMVGDPLDPMEERALSAILDQVTIALDRANLTIRSVED
QARLERERFQSTLLSSISHDLRTPLATITGAVTSLKEFGERMPVESRRDLLQSIEEEGER
LSRFVGNLLDMTRIEAGALEAKHDWVDLNDVISDAIARARRVAPGIDISASIARDLPLVR
ADSLLLGQVLFNLIDNACKHGGGEPVTVYARADDTMLSLSVTDMGKGISEKDIDRIFEKF
YRRGKGADGRKPGTGLGLAIAKGFVEAMGGTISVESPAVKRIGTRFTLRFPLEDMEKDRA
EA
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcccagcgcgacaccaaccgccgtcccgatcctgatgccctgctggggctg
gcgaaccgggacgggcggggaaaactgacgatcttcctgggagctgcccccggcgtcgga
aaaacctatgccatgctgtcgcgtgctcgcggtcaaaagaccgcgggcatcgatatcgtt
atcggcctggtggagacccatggccgcagcgaaacggagctgctgacggagggattggaa
atcctgccgcgcaagcagatttcctacaaggaccgggtgctggaggaattcgatatcgac
gcggcgcttgtccgtcgccctgcaatcattattgtcgatgaactggcccatagcaatgtc
ccggaaagccggcatccgaaacgccaccaggatatcgaggagcttcttgccgccggaatc
gatgtctggacggccctgaacatccagcatctcgaaagcctctcggaaatcgtcacacag
attaccggcgtccaggtgcgagaaaccgtgccggacagggtgttgaaacaggccgatgtg
gtcgtgctcatcgacctgccaccggaagaactgatcgtccggctgcgggagggcaagatc
tacctgcctgataatgcccgccgtgccactgacagcttctttcgtcttggcaatctgact
gcgctacgcgaacttgccttgcgccgcaccgccgaccgggtcgatgaccagatggtcgat
tacctcaagcagaatgccatcgagggaccgtggcgcacgggtgaacggcttcttgtctgt
atcggcccggatgcactctcggaaaaagtggtgcgaaccgccagcaatctcgcctccggc
atgaatgcccgctggttggtcgtctccctggaacaagccgatcaggcggatgaaaatccc
aacgaccagacccggatcgaagagctgtttcgcttggcggaacgatttggtgccgaaacc
cggcgtgtccagggccgcgatttcgttcacgagatcctgcgtctcgccaagaaggaacac
gtcacccagatcgtcatcggtgcaccgcagcgttcccgctggcaaaagctttttcgacac
tccctgccggatgccttgctggaagtcagatcgggcatgggcattcacctgatcaccgga
gaggccgcgcctgacacagtaaagcgcgtccagcggaacaaagccttttccctgaaaacc
ttgccggttcggccaagggatatcatcactgctctggtcacaaccacggtggccgccatc
ggcgcacgcggcatcattgagttcgtggcgctacccaatgtgtcgatgctgtttctgctg
gccgtgctggtttcggcgctacgtgagggctatgtcgccgccgttctgacctcggtgctg
tcggcgctggcctataatttctttttcatctcaccggttttcaccctgaccatcgccgcg
ccgcatgaagtctttgccttcgtcatgttcatcgctgccgcgttgattgccggtggcatt
gccgcacggatccgcgcccaggggcagatcgctgcccgtcgcgccacacagacgcagatc
ctctatgatgtctcatcaaaactcgcaggcacggtggatgccgatggcgtggtctggacc
gctgtcagccaattgaacggcattattaaaaggcctgtcgccttgctttcctcgcaaaac
ggcacgctgaccttacgctcctgctggccacccgataccgagcttggcgtcgcagaaatg
gcggcggcgcgttttgcccttgagaaaggcgaggccgccggtgccggaacaggcaccttg
ccaaattcgaagctgcaatttcggcccctgcgcagtcccgccggtacgctggcggtctgt
ggccacgaaatggtgggagaccctctcgacccgatggaagagcgagcgctttccgctatt
ctggaccaggtgacaatcgctctcgaccgcgccaatctgacgatccgcagcgtcgaggac
caggcgcggctggaacgagagcggttccaatcgacgctgctgtcttccatctcccatgat
ctgcgcacgccgctcgccaccattaccggcgctgtcaccagcctgaaggagtttggcgag
cgcatgcccgtcgaaagccgccgcgacctgctgcaatccatcgaagaagagggtgaacgg
ctgtcccgtttcgttggcaacctcctcgacatgacccgcatcgaagcgggagcactggaa
gcaaaacacgattgggtggatttgaacgatgtgatttcggatgctatcgcccgcgctcgc
cgtgttgcgccgggcatcgacatcagcgcaagcattgcccgtgacctgcccttggtgcgg
gcggatagcctgcttctgggtcaggtattgttcaacctgatcgacaatgcctgcaagcat
ggtggtggcgagccggtcaccgtctatgcccgcgccgatgatacaatgctgtcgctttcg
gtaactgacatgggcaagggcatttcggaaaaagacatcgaccggatatttgaaaagttc
taccgtcgtggcaaaggagcggatggccgcaagccggggaccggccttggccttgccatt
gccaagggctttgtcgaggcgatgggcggaacgatcagcgttgaaagcccggcggtgaaa
cggataggcacgcggttcacgctgcgatttccgctggaggatatggaaaaggaccgggct
gaggcatga
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