Agrobacterium vitis VAR03-1: RvVAR031_35140
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Entry
RvVAR031_35140 CDS
T08810
Symbol
dadB
Name
(GenBank) alanine racemase, catabolic
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00470
D-Amino acid metabolism
avf01100
Metabolic pathways
avf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RvVAR031_35140 (dadB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RvVAR031_35140 (dadB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avf01011
]
RvVAR031_35140 (dadB)
Enzymes [BR:
avf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RvVAR031_35140 (dadB)
Peptidoglycan biosynthesis and degradation proteins [BR:
avf01011
]
Precursor biosynthesis
Racemase
RvVAR031_35140 (dadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
BCH55904
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All DBs
Position
2:complement(281596..282720)
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AA seq
374 aa
AA seq
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MDMSISQDLNADAFSARLVIDLNALADNYRQLAAEAAPAEASAVIKADAYGLGAAHVAPA
LYRAGCRKFFVAHVQEAAVLRQHLPGDAELFILNGLQPGAEPFAAANGFIPVLNSLEQLA
NWSKTASEFGRTLPAILQFDTGMSRLGFSSEEANVLAGDPALLSGLSIRFIMSHLASADD
SASSQNAAQFSVMRERLAQFPGTALCFSNSGGIFIDKQFHGALVRPGVALYGAVPSDLAG
RRMKPVVRVDAKVIQTRTVPAGACVGYGATYVAIKETRLATIAIGYADGLPRCLSDRGAA
YYGDIRLPIVGRVSMDSMTLDISALPPGTLKLGSLVEMIGPHQSLEDVAQAAGTIAYEIL
TSLGHRYHRDYISA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtctatcagccaggatctgaatgccgatgcgttttccgcccgcctcgtgatc
gacctcaatgcgcttgccgacaattaccgccaattggccgctgaggccgccccggcagaa
gcctccgctgtcatcaaggccgatgcctatggccttggagctgcccacgtcgcccctgcc
ctctaccgggctggatgccggaaattcttcgtggcgcatgtgcaggaagcagccgtgctg
aggcaacatttgcctggggatgcagaactgttcattctcaacggtttgcagccgggcgca
gaaccatttgcagcggcaaacggcttcataccggtgctcaattcgttagagcagcttgcc
aattggtcgaaaacagcgagtgagtttggacggaccctgcccgcgatcctgcaatttgac
accggcatgtcgcggctcggcttttcatcggaagaagccaatgttctcgcgggcgatccc
gccctgttgtccggcctctccatccgcttcatcatgagccatctcgcctcagccgatgac
agcgccagcagccagaatgccgctcaattttcggtcatgcgcgagagattggcgcaattt
ccaggcactgccttgtgcttttccaattcaggcggcatctttatcgacaagcagtttcac
ggcgcgctggtccgccccggcgttgccctttacggtgcagtacccagcgatctggcagga
cgccgcatgaagccggtggtgcgggtggatgcgaaagtcattcagacacgaacggtgcca
gccggagcctgtgtcggctacggcgcgacctatgtggccattaaggaaacccgactggcc
acaatcgctattggctatgccgatggcctgccgcgttgcttgagcgaccggggtgccgct
tactatggtgacatccgtttgccaattgtcgggcgggtgtcgatggacagcatgacactc
gatatttcggccctgccacccggcacgttgaagctgggaagtctggtggagatgattggt
ccgcaccagagcctggaggatgtagctcaggcggcgggcaccattgcctatgaaatcctg
accagccttggtcaccgctatcaccgcgactatatttcagcataa
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