KEGG   Agrobacterium vitis VAR03-1: RvVAR031_35160
Entry
RvVAR031_35160    CDS       T08810                                 
Name
(GenBank) GntR family transcriptional regulator
  KO
K23466  GntR family transcriptional regulator, trigonelline degradation regulator
Organism
avf  Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:avf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:avf03000]
    RvVAR031_35160
Transcription factors [BR:avf03000]
 Prokaryotic type
  Helix-turn-helix
   GntR family
    RvVAR031_35160
SSDB
Motif
Pfam: FCD GntR HTH_Crp_2 TrmB HTH_10 Rrf2 HTH_24 HTH_27 HTH_IclR HTH_5 HTH_11 HTH_CodY MarR_2 EAP30 TFIIE_alpha MarR DUF6712 Peptidase_M66 HTH_41
Other DBs
NCBI-ProteinID: BCH55906
LinkDB
Position
2:283380..284105
AA seq 241 aa
MSGMVAGKAYGMTETIKVERPTKTLRELALEKVRDAIISGYFKPGDRLVERDLCAQLGVS
RTVVREVLRHLESEGLVSNPQSKGPMVALLDVDEARQIYEIRAALEGMAARLCAERGDTS
IVAGLSGALDAIKDAYVRQDMAEVLKETTRFYETLFTRIDRQIAWGVVRQMTVRINHLRS
MTIKTDGRATEGPAQMQRIVEAIRNGDGLAAEQAAIDHVQRASSIAVAVLAQQARSAVET
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgagcggtatggttgccgggaaggcttatggaatgacagagacgataaaggtggagcgt
cccaccaagacgctgcgggaactggcgcttgaaaaagtccgcgatgcaatcatcagcggc
tatttcaagccgggcgaccggttggtcgagcgtgatctctgcgcgcagcttggagtgagc
cgaacggtggtgcgcgaagtgctgcgacatctggagtccgagggtctggtcagtaacccc
caaagcaaggggccgatggtggcactgctggatgtcgatgaagcccggcagatctatgaa
atccgcgcggctttggaaggcatggcggcgcgactttgcgcggagaggggcgacacgtct
attgtggctggcttgtcaggggcgttggacgcgatcaaggacgcctatgtccgccaggac
atggcagaggttttgaaggaaacgacgcgattttacgagacgctgtttacccggattgac
aggcagatcgcctggggtgttgtgcggcaaatgaccgtgcggatcaatcatctgcgctcg
atgaccattaagaccgatggccgggcaacagagggaccagcgcagatgcaaaggattgtc
gaggcgatccgcaatggcgatggactggctgccgaacaggccgctatcgatcatgtgcag
cgcgcttcctctatagccgtcgctgtgctggcgcagcaggcccgatccgccgtcgagacc
gaataa

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