Agrobacterium vitis VAR03-1: RvVAR031_35340
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Entry
RvVAR031_35340 CDS
T08810
Name
(GenBank) ribose ABC transporter permease
KO
K10440
ribose transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_35340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_35340
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAR031_35340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
BCH55924
LinkDB
All DBs
Position
2:complement(301800..302807)
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AA seq
335 aa
AA seq
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MKNATDITMTTVQSAATPSRVDVQGFFLRYGLFLLLVLLILLFAWLRPSFVSGGNINDML
RSASIAALMFLGLTWIIAAGEIDVSFMSVAALANMVVAALVASGQGWAIACLAGLLVGLV
FGLVNGLLVAIFKLPALVITIATGGLAGSIAAAIGLGTSISLSSTGFVGSLLHVNLGIIP
LLTVIVALLYAAAWFIQERLTFGHYLYAMEQNRAAVIEAGVPVNRLLLMLYVLSGLVSAL
AGILLTADLSSGQPYIGSSYFIDGLTSVLLGGMALKYGKPNVIGTVTAVLLLATLLSGAA
LLGWTDAQRQIVRGLLLLCGVATVVWARRKTRAHI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgcaacggatatcaccatgacgactgtgcaaagtgccgcaactccaagccgg
gtggacgtacagggatttttcctgcgctacggattattcctgctgctggtgctgcttatt
cttctctttgcctggctcaggcccagcttcgtcagtggcggcaacatcaatgacatgctg
cgctcggccagcattgcagccctgatgtttctggggctgacctggatcattgcggcaggt
gaaatcgatgtcagcttcatgtctgttgccgcgctcgccaatatggtggtggcagcgctg
gttgcatcaggccaaggctgggctatagcctgtcttgcgggcctgctggtcggccttgtc
tttggcctggtgaatgggttgcttgtggcaatcttcaaacttccggccctggtgatcacc
atcgccactggcgggctggccggatcgattgccgccgccatcggcctcggcacatcgatt
tctctctcctccaccggcttcgttggctctctcttgcatgtcaatctcggcatcatcccg
ctgctgacggtgatcgtcgcccttctctatgccgccgcctggtttatccaggaaaggctg
acctttgggcattatctctatgccatggaacagaaccgcgccgccgtgatcgaagcgggt
gtaccagtcaaccgattgctgctgatgctctacgtgctgtctggccttgtgtcggcactg
gcgggcatcctgttgacagccgatctttcgtccggtcagccctatatcggcagttcctat
ttcattgacggcctgacctcagttctgctggggggcatggcactgaaatacggcaagccc
aatgtcatcggcaccgttaccgccgttctgctcctggccacacttttgagcggtgccgcc
ctgctcggctggacagatgcgcagcgtcagatcgtgcgcggcctgctgctgctatgcggc
gtcgccacggttgtctgggcaagacgcaagacacgcgcccacatttaa
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