Agrobacterium vitis VAR03-1: RvVAR031_36140
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Entry
RvVAR031_36140 CDS
T08810
Name
(GenBank) DNA methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00270
Cysteine and methionine metabolism
avf01100
Metabolic pathways
Module
avf_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RvVAR031_36140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_36140
03032 DNA replication proteins [BR:
avf03032
]
RvVAR031_36140
03036 Chromosome and associated proteins [BR:
avf03036
]
RvVAR031_36140
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
avf02048
]
RvVAR031_36140
Enzymes [BR:
avf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RvVAR031_36140
Transcription factors [BR:
avf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RvVAR031_36140
DNA replication proteins [BR:
avf03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RvVAR031_36140
Chromosome and associated proteins [BR:
avf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RvVAR031_36140
Prokaryotic defense system [BR:
avf02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RvVAR031_36140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
BCH56004
LinkDB
All DBs
Position
2:complement(383414..385120)
Genome browser
AA seq
568 aa
AA seq
DB search
MFEVCPKQATKGRGVRVLHASPDCTHFSVAKGGKPVSKRRRSLAWVVCRWAGQVRPETIT
LENVPEIQTWGPLIAKRCPITGRVMRLDGSVAAKGERAPVQEQWLIPDPKHKGRIWKAWQ
KHMARLNYNFEGKVLVCADYGIATIRKRFFGILQADGGKIVWPERTHAPRKIAKSLGLKP
WVGAHTVIDFSIPVKSIFGRKKNLAPATLRRTARGVMRYVIEAAKPFIVPITHTKGSNQA
RSADEPLCAITTAKGGENMVAVPSLAPLRDKDAASYMSPDCAHFTHDQQSVWAKNSQIVR
KELMKIGVAKPLVSAASLQRQFTGSVGAAMEEPAPTFESSAKTALVAASLQRQFGESNGA
DIEEPVPTLVAEGQSKTALVSAFLAQHNDGPKAGINARDVLDPVSALTTTGSQQGVVAAS
MLNLRGSDKAGRDMREPVSTLCANGNHAGLILGFLQHYYGTGGQDQSLADPLGALTSKAR
HGLVTVKVGRETFVITDIGMRMLEPEEGAAAHGFAKGSLPDTIILDGKTVKLTKTQKYHL
VGNSVPPHMVRLLAECNVRRELVLEAAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaggtttgcccgaagcaagcaacgaagggtcgcggtgttcgggtgttgcatgcg
tcaccggactgcacgcatttctctgttgccaagggtggaaagcctgtttcaaaacgccgc
cggtctctggcatgggtggtttgccgctgggccgggcaggtgaggcctgagacgatcacg
cttgaaaacgtgccggagatccagacgtgggggccgctgatcgccaagcgctgcccgatc
acaggcagagtcatgcggttggacggttctgttgccgccaagggcgagcgggctccggtt
caggaacaatggctgatccccgatccgaagcacaagggccggatttggaaggcatggcag
aagcacatggccaggctgaattacaatttcgagggcaaggttctggtctgcgctgactac
ggcatcgctaccattcgcaagcggttcttcggtatcttgcaggccgacggcggcaagatc
gtctggccggaacgaacccacgcgccacgcaagatcgccaaaagccttggcctgaagcca
tgggttggcgcgcataccgttatcgatttttcgataccggtgaagtccatcttcgggcgc
aagaagaatctagccccggccacgttgcgacgtactgcccgtggcgtaatgcggtatgtc
attgaggcggcaaagccgttcattgtgccgatcactcatacgaaagggtcaaaccaagcg
agatcggctgatgagcccctttgcgcgatcaccacggccaagggcggggagaacatggtg
gcggtgccttctttggccccgctgcgtgataaggacgctgccagctatatgtctcccgat
tgcgcacatttcactcacgatcagcagagcgtatgggccaaaaattctcagattgttcgc
aaagagcttatgaaaatcggcgtagccaagcctctggtgagcgcggcctcactacaacgc
cagttcactggtagcgttggtgcagcaatggaagagccggcgccgacatttgaaagctcg
gcaaaaacggcactagtcgccgcgtctcttcagcgtcaatttggcgagagcaatggtgct
gatattgaagagccggtcccgacactggttgccgagggacagagcaagacagcgctggtt
tcggcatttcttgcccagcacaatgatggccccaaggcggggatcaatgcccgggatgtt
ctcgaccctgtctctgcattgaccacgactggttcccagcaaggtgttgtcgccgcctcg
atgctgaacctgcgtggaagcgacaaggccgggcgcgatatgcgcgagccggtttcgaca
ctttgcgcgaatggcaaccatgccggtctgatccttggcttcttgcagcattattatggc
acgggtgggcaggatcagtccctcgccgatccgcttggtgcgcttacgtccaaggcgcgc
catgggctagtaacagtgaaggttggtcgggagaccttcgtcatcaccgatatcggcatg
cggatgctggagccggaagagggcgccgccgctcatggctttgccaagggtagcctgccc
gataccatcattctcgacggcaaaaccgtgaagctgaccaagacccagaaataccacctg
gtcggcaacagcgtgccgccgcacatggtgcgccttctggcggaatgcaacgttcgccgt
gaattggtgctggaggctgccgaatga
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