Agrobacterium vitis VAR03-1: RvVAR031_37030
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Entry
RvVAR031_37030 CDS
T08810
Symbol
rbsA1
Name
(GenBank) ribose import ATP-binding protein RbsA 1
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_37030 (rbsA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_37030 (rbsA1)
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
RvVAR031_37030 (rbsA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_22
AAA_23
AAA_15
TsaE
MMR_HSR1
AAA_30
AAA_25
DUF815
Motif
Other DBs
NCBI-ProteinID:
BCH56093
LinkDB
All DBs
Position
2:455925..457460
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AA seq
511 aa
AA seq
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MMSVQTTTLDAVPLGDRAPILEMRGISQIFPGVKALDGVNIALYPGEVTALIGENGAGKS
TLVKILTGIYRPNEGEIVIDGSPVTFVNAQAAIDAGVTAIHQETVLFDELSVAENIFLGH
APKTRFGFIDWNGINSKARALMDRLESKIVPTIKLKDLSIAQRHLVAIARALSVEARIVI
MDEPTAALSRKEIDDLFRIVEGLKRDGKAILFISHKFDEVYEIAENFAVFRDGRMVGSGQ
LQQTPQDEIVRLMVGRDVHDAFPKIDFAIGAPVLSVSHYCHETEFRDISFHLRKGEILGV
YGLIGAGRSELCQSLFGITRPASGTVTLEGRVVDIRSPADAIAAGIVYVPEERGRHGLAL
QMPIYQNMSLPSLARVSARGFLKAINEFSLARHYAERLDLRAAALSVPVGTLSGGNQQKV
VIGKWLATKPKVIILDEPTKGIDIGSKAAVHGFISELAAEGLSIIMISSELPEILGMSDR
VMVMREGLQAGIFEREALTPEALVRAATGNA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgtccaaaccacaacgcttgatgccgtaccgctgggtgatcgcgccccgata
ctggagatgcgcggcatttcgcagatctttccgggtgtgaaggcgttggatggcgtgaac
atcgccctttatcccggtgaggtcacggcattgatcggtgaaaatggtgccggtaaatcg
acgctggtcaagatcctgacgggcatttaccggcccaatgagggcgagatcgtcattgat
ggttcgccggtgaccttcgtcaatgcccaggctgccatcgatgcgggcgtaacggctatc
catcaggaaaccgtgctgttcgatgagttgagcgttgcggaaaacatctttcttggtcat
gcaccgaaaacccgttttggcttcatcgactggaacggcatcaactccaaagccagggcg
ctgatggaccggctggaaagcaagattgttccaaccattaaattgaaagatctctcgatt
gcccagcggcatctggtggcgattgcgcgggcgctttcggttgaagcgcggatcgttatc
atggacgagccgacggcggccctgtcgcgcaaggaaatcgatgatctgtttcgcatcgtt
gaagggctgaagcgggatggcaaagcgatcctgttcatcagtcacaaattcgatgaagtc
tatgaaatcgccgagaatttcgcggtgttccgtgatggaagaatggtcggttctggtcag
ttgcaacagacgccgcaggatgagatcgttcggctgatggttggccgggatgtgcatgac
gcctttccaaagatcgactttgccatcggcgctccggtgctttctgtctcgcattattgc
cacgaaaccgagtttcgcgacatttcctttcacttgcgcaagggcgagatccttggcgtt
tacggcttgatcggtgcgggccgttccgaactgtgccagtcgctgtttggcattacccgc
ccagcctctggaacggtgacgctggaggggagggttgtcgatatccgctcgcctgcggat
gccattgccgctggcatcgtctatgtgccggaagagcgcggtcgccatgggttggcgctg
caaatgccgatttaccagaatatgtccctgccttctttggcgcgtgtttcggcacgcggt
tttctcaaggccatcaatgaattttcgctggcgcgccactatgccgaacggctggacctg
cgggcggcggctctgtccgtgcctgttggtacgctgtcgggtggcaatcagcagaaagtg
gtgattggtaaatggctggcgaccaagccgaaggtcattattctcgatgagccgaccaaa
gggatcgatatcggttccaaggccgccgtgcatggctttatctccgaactcgcggcagag
ggcctgtcgatcatcatgatttcctccgaactgccggagatccttggcatgtccgaccgg
gtgatggtgatgcgggagggattgcaggctggaatttttgagcgagaggcgctgacaccg
gaagctctggtgcgcgcggcaaccggcaatgcgtga
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