Agrobacterium vitis VAR03-1: RvVAR031_37040
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Entry
RvVAR031_37040 CDS
T08810
Name
(GenBank) ABC transporter permease
KO
K10560
rhamnose transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_37040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_37040
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
RvVAR031_37040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
BCH56094
LinkDB
All DBs
Position
2:457470..458471
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AA seq
333 aa
AA seq
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MKSLLKHREIALGVIILLLIAGFSTRADGFASPGNLATIFNDTSILIILALAQMTVILTK
SIDLSVAANLAFSGMAVAMLDSNFPGLPLVLLIAAAVLIGAALGAINGYLVWLLQIPPIV
VTLGTLTIYRGMAFVLSGGAWVNAHQMTPDFLNLPRIVLMGLPVLAWIAVIVVIAMAVVL
GRTTFGRATYAAGGNATAAVYAGIDIGWTRFLAFVLSGGLAGLCGYLWVSRYAVAYVDIA
SGFELDSVAACVIGGISIAGGIGSVAGTVLGALFLGVIKNALPVIGISPFAQMAISGVVI
VLAVVFNARAERRKGRIILRDRAAGSTVQEVTA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcttgctgaaacaccgcgagatagcattgggtgtcatcatcctgttgctcatc
gccgggttctccacccgtgcagacggttttgcctcgccaggcaatctggcgacgatcttc
aacgatacatctatcctgatcattctagcgctggcgcagatgaccgtgatccttaccaaa
tcgatcgatctgtcggttgccgccaatctcgccttttccggcatggcggtggcgatgctg
gattcgaacttccccggcttgccgctggttctgctgattgcggcggcagtgctgatcggg
gcggccctcggtgctattaatggctatctcgtctggttattgcagatcccgcccatcgtc
gtgacgttgggtacgctgacgatctatcgcggcatggctttcgtgttgtctggcggggct
tgggtgaacgcccatcagatgacgccggatttcctcaacctgccgcgcattgtcctcatg
gggcttccggtcctggcatggattgcagtgatcgtggtcattgccatggctgttgtgctg
gggcgcaccacatttggtcgcgccacctatgccgccggcggaaacgcgacggctgcggtt
tatgctggcatcgacatcggttggacgcgatttctggccttcgttttgtcaggcggactt
gctggcctctgcggctatctctgggtgtcgcgctacgcggttgcttatgtggatattgcc
agcggttttgaattggacagcgtggcggcctgcgttatcggcggcatttcgattgccggt
ggcatcggctcggtcgctggcaccgtgctgggggctttgtttctgggcgttatcaagaat
gcattgcctgtcatcggcatttcgcccttcgcccagatggcgatatccggtgtggtgatt
gttctggctgtggtgtttaacgcccgggccgaacgcagaaagggccggattatcctgcgg
gacagggccgcgggcagtacggttcaggaggttacggcatga
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