Agrobacterium vitis VAR03-1: RvVAR031_37180
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Entry
RvVAR031_37180 CDS
T08810
Name
(GenBank) putative 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RvVAR031_37180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avf03400
]
RvVAR031_37180
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RvVAR031_37180
DNA repair and recombination proteins [BR:
avf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RvVAR031_37180
Prokaryotic type
RvVAR031_37180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
BCH56108
LinkDB
All DBs
Position
2:471798..472346
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AA seq
182 aa
AA seq
DB search
MIEFNSSAVDIARELIGAELFVEGVGGMIVETEAYERNDPASHSFRGPTPRNNAMFGQAG
HVYVYRSYGIHWCLNIVCRPGSAVLIRALAPSQGVEVMQARRGSVAPRFLCAGPGRLAQA
LGITAQHDGLPLALPPFQLLPATVHPSVAIGPRIGITKAVDHPWRFGLAGSKFLSKPFPA
VL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgattgagttcaacagcagtgctgtcgatattgcccgcgagctgattggggctgagctt
ttcgtggagggtgtcggcggtatgatcgtcgaaaccgaggcctatgagcgcaatgatccg
gcatcccatagctttcgggggcccacaccgcgcaataatgcgatgtttggtcaagccgga
cacgtctatgtctaccgttcctacggcattcactggtgcttgaatattgtttgccggccc
ggcagtgcggttctgatccgggcgctcgcgccaagccagggtgtggaggtcatgcaggcg
cggcgtggtagcgtggcgccgcgttttctatgcgcaggtccgggccgtctggcccaggca
ttgggcatcaccgcacaacacgatggcctgcctctcgccttgccaccatttcagcttctg
cctgccacggtccatccaagtgtggcgatcggtcctcgcattggcattaccaaagcggtc
gatcacccctggcgcttcggtttggcggggtctaaatttctaagcaagcctttcccggct
gtcctctag
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