Agrobacterium vitis VAR03-1: RvVAR031_38400
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Entry
RvVAR031_38400 CDS
T08810
Symbol
rbsC_2
Name
(GenBank) sugar ABC transporter permease
KO
K10440
ribose transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_38400 (rbsC_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_38400 (rbsC_2)
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAR031_38400 (rbsC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF6007
Motif
Other DBs
NCBI-ProteinID:
BCH56230
LinkDB
All DBs
Position
2:complement(603201..604247)
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AA seq
348 aa
AA seq
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MAEITTGKPQQSSDKPPQKGLSDRQKDIIQKFAALGCLVVLAAVFALTSNAFLSVNNGMT
IALQVTSIAFLGIGATYVIITGGIDLSVGSVLALAGVVAALAVKELGAPVWIGMVLGVLT
GTACGVINGLVITRLKLPPFIATLGMMLIARGVALQITGARAVSGLGESFGVLGNGSLLR
FESIDDQGFPVVSFPGIPYPVVLMVIIAVAAAFVLNRTVLGRHIYATGSNADAAQLSGVN
VARVTAFTYIVSGTLAGLTGCVLMSRLVTAQPNEGVAYELDAIASAVIGGTSLIGGVGTI
SGTFIGAFVIGILRNGLNMNGVSAFTQQIIIGLVILGTVWIDQIRNRK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatcaccactggcaagccccagcaatcgagcgacaagccaccgcaaaaaggt
ttgagcgaccggcagaaggatatcatccagaaatttgcagcgcttggctgcctggtcgtt
ctggccgctgtgtttgccctcacttccaatgctttcctgagcgtcaacaacggcatgacg
atcgcactacaggtcacgtcgatcgcatttctcggcattggagcaacctatgtcatcatc
accgggggtattgatctctcggtcggctccgtcctggcgctggccggggtggtcgccgcc
cttgccgtgaaggaattgggcgcgcctgtgtggatcggcatggtgctcggcgttctcacc
ggcaccgcctgcggggtcatcaatggcctggtcattaccagactgaagctgccgccgttc
attgccacccttggcatgatgctgattgcacggggcgtcgcactgcaaatcaccggcgcg
cgggcggtctcaggccttggcgaatccttcggcgttctcggcaatggctcactgctgcgc
ttcgaaagcatcgacgatcaaggatttccggtggtcagctttccaggcattccctatccc
gtggtgctgatggtcatcattgccgtggccgccgccttcgtactcaaccgaaccgtgctt
ggtcggcatatctatgccaccggctcgaatgcggacgctgcccaactctcaggcgtcaat
gtcgcccgcgtcaccgccttcacctatatcgtttccggcacgctggccggtctcaccggc
tgcgtgctgatgtctcgtctcgtcaccgctcagccgaatgaaggcgtggcctatgagctg
gatgccatcgcttcggcggtgattggcggaacctcgctgatcggcggtgtcggtacgatt
tccggaaccttcatcggcgcctttgtcatcggcatcctgcgcaatggcctgaacatgaac
ggcgtctccgccttcacccagcagatcattataggcctcgtcattctcggcaccgtctgg
atcgaccagatccgcaatcggaaataa
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