Agrobacterium vitis VAR03-1: RvVAR031_38470
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Entry
RvVAR031_38470 CDS
T08810
Name
(GenBank) alpha/beta hydrolase
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RvVAR031_38470
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
RvVAR031_38470
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_95_cat
Glyco_hyd_65N_2
Glyco_hydro_95_C
Glyco_hydro_65C
Glyco_hydro_65N
Motif
Other DBs
NCBI-ProteinID:
BCH56237
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Position
2:611389..613614
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AA seq
741 aa
AA seq
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MNDNELWYDRAASVWTEALPVGNGRLGAMVFGDAWNERLQINESTFWSGGPYQPINPDAH
AALPEVRNLILAGRYQEADRKAYEGAMAKPDRQASYQPIGDVWLDLHHDMTVTNYRRSLD
LETAVAVTQYDCHGVHFRRDVFVSAIQDVIICRIAVDQPGALSMTVMLSSPQNGDPIDIA
DATLGYDGRNRRQNGIDGALRFAFRVRVLAEGGFVDTGEETIRVREASSVVLLIDAGTSF
QNYKTIDGDPQAQIKARLDAAAMLPYEALLAAHVTEHRRLFDRMQITLGDKSVPTIPTDK
RIAAYAEGNDPSLAALYLQYGRYLAISCSRPGTQAANLQGIWNEDILPAWGSKYTVNINL
EMNYWLADVANLSETFLPLVELVEDVAETGREMAKAHYGARGWVLHHNTDIWRATGPIDG
PHWGLWPMGGAWLCAQLYDHYRFNPDRAVLERIYPLIKGAVEFALDTLVALPASDYLGTC
PSLSPENSHPFGSSLCAAPAMDNQILRDLFEAFADASATLGQDGELHAAAVATRARLPED
RIGKGGQLQEWMDDWDLDAPEQQHRHVSHLYGLYPSLQIDPLETPDLAKAAQVVLERRGD
DATGWGIGWRLNLWARLGNGNRAAEVLAKLLTPERTYPNLMDAHPPFQIDGNFGGAAGIV
EMLVQSRPGELRLLPALPEQWSSGSLKGVRIRGGHTVDLSWQAGKLSSLRITAGHSGPLT
IRQPADVLEVQLREGEVWEGR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataatgaactctggtacgatcgtgccgcatccgtctggaccgaggctcttccc
gttggcaatggtcgtctgggggccatggtgttcggagatgcctggaatgaacgccttcag
atcaatgagagcacattctggagcggtggcccttaccagccgatcaatcccgatgcccat
gccgccttgcccgaggtgcgcaatctgatccttgccgggcgctatcaggaggccgatcgc
aaagcctatgaaggggccatggccaagccggatcggcaggcctcctatcagccgattggc
gatgtctggcttgatctacaccatgatatgaccgtcaccaattatcgtcgttcgctcgat
ctggaaacggctgttgctgtcacgcaatatgattgccacggcgtgcattttcgccgcgat
gtcttcgtctctgccatccaggatgtgattatttgccggattgcggtggatcagccgggt
gccttgtcgatgacggtgatgctcagcagtccgcaaaacggtgacccgattgatatcgcc
gacgccacccttggctatgacgggcgcaatcgtcggcagaacggcattgacggggctttg
cgctttgccttccgggtgcgggtgttggccgagggtggctttgtcgatactggcgaagaa
accattcgggtgcgtgaagcgtccagcgtggtgttgctgatcgatgcaggcaccagcttt
caaaactacaagactattgatggtgatccgcaggcgcagatcaaagcacgcctggatgcg
gcggctatgctgccctatgaggcgctgctcgcggctcatgtcacagagcatcgccgcctg
tttgaccggatgcagattacccttggtgacaagtccgtaccaacgatcccgaccgacaag
cgcattgccgcctatgccgaaggcaatgatccctcgctggccgcgctctatctgcaatat
ggccgctaccttgccatttcctgttccagacccggcacgcaggcggccaatctccagggc
atatggaatgaagacattctgccagcctggggcagcaaatacaccgtcaacatcaatctg
gagatgaattactggctggccgatgttgccaatctgtcggagaccttcctgccgctggtg
gaactggtggaagatgtagccgaaaccggccgcgagatggccaaggcccattacggcgcg
cgcggctgggttctgcaccacaacaccgatatctggcgtgccaccggcccgattgatgga
ccccattggggtctttggccgatgggcggcgcctggctctgcgcccagctttatgatcac
tatcgcttcaatcctgatcgcgccgtgctggagcgcatctatcctttgatcaaaggcgcg
gtagaatttgcgctggatacgctggttgctttgcctgctagcgactacctcggcacttgc
ccctcactgtcgccagaaaattcccaccccttcggctcgtcgctttgcgccgcacccgcc
atggacaaccagattctccgcgacctgtttgaggccttcgcggatgccagcgccacactt
ggccaagacggtgagcttcacgccgcggcagttgccacccgagcccgcctgccggaagac
cgtatcggcaaaggcggtcaattgcaggaatggatggacgactgggatctggacgcgcca
gagcagcagcatcgccatgtctctcatctctatgggctttatccgagcctgcaaatcgac
ccattggaaacgccggatctggctaaggccgcacaggttgttctggagcggcgcggcgat
gatgcaacgggctggggcattggctggcggctgaacctttgggccagacttggcaatggc
aatcgagccgcagaggttctggccaagcttttgacccctgagcgcacctatccaaacctg
atggatgcccatcctcccttccagatcgacgggaattttgggggagcggctgggattgtc
gaaatgctggtgcaatcgcgccccggcgagcttcgcctcctgcccgccttgccggaacaa
tggtcaagcggcagtctgaagggcgtccgcatccgtggcggtcacacggttgatctcagc
tggcaagcaggaaaactgtcttcactccgcatcacggctggccactccgggccactcacc
atccgccaacctgctgatgtccttgaggttcaacttagggaaggcgaggtttgggaagga
cgatag
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