Agrobacterium vitis VAR03-1: RvVAR031_38620
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Entry
RvVAR031_38620 CDS
T08810
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_38620
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_38620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_38620
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAR031_38620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
BCH56252
LinkDB
All DBs
Position
2:634283..635296
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AA seq
337 aa
AA seq
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MSGDEFNSGIARRQLIKLSAFAGAVVAGASLLGVNAAHAANEALSLKGKRIGISTAGTDH
FFDLQAYNAQIAEVKRLGGEPLAVDAGRSDGKLVAQLQTLIAQKPDAIVQLLGTLTVIDP
WLKRARDAGIPVLTIDVGSSHSLNNSTSDNWGIGKDLALQLVSDIGGEGNVVVFNGFYGV
TPCAIRYDQLVNVIKYFPKVKIIQPELRDVIPNTVQDAFAQVTAILNKYPEKGSIKAIWS
AWDIPQLGATQALTAAGRTEIKTYGVDGSPEVLQLVADPASPAAADVAQQPAELGRQAIQ
NVALLLSGKTLPRESYVPALLANKQTVNEVTKKLGIG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgatgaattcaacagtgggattgcacggcgtcagctcatcaagctctcggcc
tttgctggcgcagtagttgcgggggcaagcctgcttggtgtcaatgcggcccatgcagca
aatgaagctctcagcctgaagggcaagcggatcggcatcagcacggcagggaccgaccat
ttctttgacctccaggcctataatgcccagatcgctgaagtgaagcgcttaggcggcgaa
ccgcttgccgtcgatgcgggccgtagcgatggcaagctggtggcgcaactccaaaccttg
atcgcgcaaaagccggatgccatcgtgcaattgctcggcaccttgacggttatcgacccc
tggctgaaacgggcgcgcgacgctggcattccggttctgaccattgatgtcggctccagc
cattcgctgaacaattcgacctccgacaattggggcattggcaaggatctggccctgcaa
ctggtctccgatattggcggcgaaggcaatgttgtggtcttcaatggcttttatggcgtg
acgccctgcgccatccgctatgaccagcttgtcaacgtcatcaagtatttcccgaaggtc
aagattatccagccggaactgcgcgacgtcatccccaataccgtgcaggacgcattcgcc
caggtcaccgccattctcaacaaatatccggaaaaaggctcgatcaaagccatctggtcc
gcctgggatattccgcaattgggggcaacccaggcgctgacggcagccgggcgcacggaa
atcaagacctacggcgtcgatggcagccctgaagtgttgcaactggtggcggacccggcc
tcgcctgccgccgccgatgtcgcgcaacagcccgccgaactcggtcgccaggccattcag
aatgtggcgctgctgctgtccggcaagaccttgccgcgtgagagctacgtgccagccttg
ctggccaacaagcagactgtcaacgaggtcaccaagaagctcgggatcggctga
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