Agrobacterium vitis VAR03-1: RvVAR031_39030
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Entry
RvVAR031_39030 CDS
T08810
Name
(GenBank) transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_AraC
HTH_8
SurA_N
HTH_AsnC-type
HTH_Tnp_1
HTH_28
HTH_23
MerR
HTH_30
HTH_29
ANT
Phage_CP76
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
BCH56293
LinkDB
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Position
2:687699..688730
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AA seq
343 aa
AA seq
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MKTVDARYVTANIPAFLIRSLVMTLTDFGLDASRLTAGLGIPMEDLADPACRVSFRQGRE
AILRAMKMTKGKALGLETGIREKITSVGLVGYVMITAATVGDAVKLGLDLQKDTGSMLEF
DTRESPEGVVVTAASRFHDPDIYVFLVEEAFASFMGVAHGLVGEGFKPVRVDFAYPAPAH
TEAYQRVFGCPIRFGQMENAFIYDAAWYKQPLLTSDPLSHRQLLEFMAYNRARSREAAEI
IESVERVVRQKLHSRTRISKVARALGMSERTLRRRLAESGVSFQSLLDDLRKNRTLELLG
NRNLSVEQIAFAVGFSDPHNFRRAFRRWTGTTPGALRADLSPI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagtcgatgcgcgttacgtgactgccaatatcccggcgtttctcatccgaagc
ctcgtgatgacgctcacggattttggtctcgacgcctcgcgattaacggcgggtctcggc
attcccatggaggatcttgccgacccagcctgtcgggtttcttttcgccagggacgtgag
gcgatcctgcgcgccatgaaaatgaccaagggcaaggcgcttggattggagaccgggatt
cgcgaaaagattacctctgtcggccttgtcggttatgtgatgataacggcagcgaccgtg
ggtgacgcggtcaagctcggtctcgatctgcaaaaagataccggcagcatgcttgaattc
gacacccgggaaagtccggagggtgtcgtcgtcacggcggcgagccgttttcatgatcct
gatatctatgtcttcctggtggaagaggcttttgccagcttcatgggggtcgcccacggc
cttgtcggtgagggcttcaagccggtccgggtcgattttgcttacccggcgcccgcccat
acggaagcttatcaacgggtcttcggctgtcctattcgatttggccagatggaaaacgcc
ttcatctacgatgccgcctggtacaagcaaccgctgctgacgtccgatcctcttagccac
cgccagcttcttgaattcatggcctataaccgggcgcgaagccgcgaggcggctgaaatc
atcgaatccgtcgaaagggttgtccgccagaaactacatagtcgcacgcgtatttccaaa
gtggcgcgcgcgcttggcatgagtgagcgcaccctgcgtcgcagacttgccgaaagcggg
gtttccttccagtcgcttctggatgatcttcgcaagaaccgcacgctcgaactgttgggc
aacaggaacctgtctgtcgagcagatcgcatttgcagttggattctcggacccgcataat
ttccggcgcgccttccgccgttggactggcaccacgcccggtgcgctgcgtgcggatcta
tcgcctatttga
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