Agrobacterium vitis VAR03-1: RvVAR031_39790
Help
Entry
RvVAR031_39790 CDS
T08810
Name
(GenBank) amidase
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00330
Arginine and proline metabolism
avf00360
Phenylalanine metabolism
avf00380
Tryptophan metabolism
avf00627
Aminobenzoate degradation
avf00643
Styrene degradation
avf01100
Metabolic pathways
avf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RvVAR031_39790
00360 Phenylalanine metabolism
RvVAR031_39790
00380 Tryptophan metabolism
RvVAR031_39790
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
RvVAR031_39790
00643 Styrene degradation
RvVAR031_39790
Enzymes [BR:
avf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
RvVAR031_39790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
BCH56329
LinkDB
All DBs
Position
2:730147..731556
Genome browser
AA seq
469 aa
AA seq
DB search
MQADATALAQAIAHGRLSATEAMQASISATEALNDLGAIAYIDAEKGLEAARAIDALPLD
TKPRSAMAFAGVPTLAKDLGGPFAGFPVVAGSRLMARRGGLVDSDLAVRFRAEGFCVFGL
TTSPEFGLSLASEPQIGPICRNPLDSTRTAGGSSGGAAAAVAAGIVAIAHATDAGGSIRV
PAACCGLVGLKPSRGAMPSGPSFGNHLGGIASELVISRSVRDTATSFSVLSGNVKGPFPP
FSPTPPKAGRLRIGILTDTGDQYATDSERLVVIDEAGRALEADGHQLVPIAFSQIAQPVA
ASNDAFVNIVCANLAETFSKFNLDASKTETLTQATIERGLALSAAHLWRSLNAMVLVSRD
LWRLFDDVDCLLCPMLSSAPLPIGSFPSDHRDTDLHFDRMARFAPLAALANASGCPAITL
PYGSDASGLPLPVQILAPMGSEPLLLQLAARLERDQRFQQRFPIAGLTQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatgctactgctctggcccaagcgatcgcacacggtcgcttgtctgccacc
gaggcaatgcaggcctcaatctctgccacggaggcgctcaatgatctgggtgccattgcc
tatatcgatgcggaaaagggccttgaagcggcgagggcaattgatgccctgccgcttgat
accaagccgcgctctgccatggcctttgcgggcgtaccaacgcttgccaaggatttgggc
ggtccgtttgcgggttttccggtggtggcgggatcaaggctcatggcgcgccgtggcgga
ttggttgattccgatttggcggtgcgtttccgagctgaaggcttttgcgttttcggcctg
accaccagcccggaatttggtctttcgctggcaagcgagccgcagatcggacccatctgc
cgcaatccgctggatagcactcgcaccgctggcggatcgtccggtggtgctgcggccgcc
gttgcggctggcattgtggccattgcccatgccaccgatgccggtggttccatccgcgtg
cccgccgcctgctgcggccttgttggcctgaaacccagccgaggtgccatgccctctggc
cccagctttggcaatcatttgggcggcattgccagcgagctggtgatttccagatcggtg
cgcgacacggcaaccagcttttctgtgctcagtggcaatgtgaaaggtccattcccgcca
ttttcacccacaccgccaaaggctggccgcttgcgcatcggcattctcaccgacaccggc
gatcaatatgccaccgacagtgagcgcttggtggtcattgatgaggcaggtcgggcattg
gaagccgatggtcatcagctcgtgcccattgccttttcacaaatcgcccagccagtggcg
gcaagcaacgatgcctttgtcaatatcgtctgcgccaatcttgccgagacgttttcgaaa
ttcaatcttgatgcatccaagacggaaacactgacacaggcgaccattgagcgtgggctg
gcactgtccgccgcccatctctggcgcagcctcaatgctatggtgcttgtcagccgcgat
ctatggcggttgtttgacgatgtcgattgtctgttgtgcccgatgctgtcatcggcaccc
ttgccgattggctctttccccagcgatcatcgggataccgatctgcatttcgaccgcatg
gcccgctttgcgccgctcgcagcccttgccaatgcatcaggatgcccagccatcaccctg
ccgtatggaagcgatgcctcaggcttgccgttgccagtgcagatattggccccgatgggc
agtgagccgctgcttttgcaactggcggcccgccttgagagggaccaacggttccaacag
aggttccccattgctggattgacgcaatga
DBGET
integrated database retrieval system