Agrobacterium vitis VAR03-1: RvVAR031_40320
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Entry
RvVAR031_40320 CDS
T08810
Name
(GenBank) hypothetical protein
KO
K01635
tagatose 1,6-diphosphate aldolase [EC:
4.1.2.40
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00052
Galactose metabolism
avf01100
Metabolic pathways
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RvVAR031_40320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_40320
Enzymes [BR:
avf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.40 tagatose-bisphosphate aldolase
RvVAR031_40320
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
Cgl0159
Motif
Other DBs
NCBI-ProteinID:
BCH56382
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All DBs
Position
2:complement(791708..792556)
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AA seq
282 aa
AA seq
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MVIACDQRGGMRSILAATPEEQAKIGNDILGETKADIARYLASHAGCVLVDPICAVPGLI
DNDILPRDTALLIGIDASGWDTSPEGYRISKMVEGVDARRVRALGATGGKIMVYLRMDTP
AANVANLETLKRTIEDFAREDFLLVVEFLTYQLEGESREDYQAKIPQLIVDGSRACLELG
SKVLKIPYPGSEQACAEVTKVAGDVPWAVLSAGVDHETFLHQVEAAMKNGASGVIAGRSL
WKDCIDLDRNVSQEKLSTIALSRLHDIQDIIGRYRNKQRVAA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtgattgcatgcgaccagcgcggcggtatgcgctccattctcgccgcgaccccggaa
gaacaagcgaaaatcggcaatgatattctcggagaaaccaaggctgacattgcacgctat
ctggcctctcatgctggctgcgtgctcgtcgatcccatctgcgccgtacccgggctgatc
gataacgacatccttcccagggatacggccctactgatcggtatcgatgcgtcgggatgg
gacacatcgcccgaaggctatcgcatttccaagatggtggaaggtgtcgatgcgcggcgc
gtgcgcgctcttggtgccaccggcggcaagatcatggtctatctgcggatggataccccg
gcggccaatgttgcaaaccttgaaaccctgaagaggaccatagaggatttcgcccgcgag
gactttcttctggtcgtcgaattcctgacctaccagcttgaaggcgaaagccgtgaagac
tatcaggccaagattccgcagcttatcgtcgacggctcacgcgcctgcctggaactgggg
tccaaagttctgaaaattccttatcccggctccgaacaagcctgcgccgaagtcaccaag
gttgccggcgatgttccttgggccgtgctttcggctggcgtcgaccatgaaacctttctc
catcaggtcgaagcagccatgaagaacggggcctccggcgtcattgctggccgctccctt
tggaaagactgcatcgacctcgaccgaaatgtctcacaagagaagctttcgacaattgcc
ctgtcccgattgcatgatattcaagacattatcgggcgctaccgcaacaagcagagagtt
gctgcgtaa
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