Agrobacterium vitis VAR03-1: RvVAR031_40340
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Entry
RvVAR031_40340 CDS
T08810
Name
(GenBank) ribose ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_40340
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_40340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_40340
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAR031_40340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ManC_GMP_beta-helix
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
BCH56384
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All DBs
Position
2:793951..794940
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AA seq
329 aa
AA seq
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MERRHFLQSATALALSAPAVLAVTRAQAESKKFKIALIPGLTTDAFYITMHKGAEAAAAA
IGAQIIFQGAPDFNPVTQVPVLDAVIAKRPDAILIAPTDTTQLVQPLKKAADAGIPLITV
DTFIGTGDYQTGAGDGDFPLSYIASDNVLGGEIAARSLASAIGDKGKVYVSNVKPGVSTT
DQREQGFKSEMAKHPGITVLETQFNDNDANKAASQLQAVYARNPDLAGVFGANLFSGLGS
ANGVQQAGQSGTIKVVAFDAPGSVVDNLKSGLIDFAIAQHPAEIGYYGVISAYAHLTGQS
IPTKIGTGFTVINKSNVTDPAVARFIYAE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtcggcattttcttcaatctgcgaccgcgcttgccttgtccgcgccggctgtt
ctggcggtgacgcgggctcaagccgaaagtaagaaattcaaaattgcgctcattccaggt
ctgacgaccgatgcgttttatatcacgatgcacaagggcgcagaagctgcagccgctgcc
atcggcgcgcagatcatctttcaaggcgccccggatttcaatccggtcacgcaggttccg
gttcttgatgcggtcattgcgaaaaggccggacgccattctcattgcacctaccgatacg
acccaactggtacagccgctcaaaaaggctgcggatgcgggcattccgctgatcacggtc
gatacattcatcgggaccggtgactatcaaacaggcgcaggggacggggactttccgttg
tcctatatcgcatcggacaatgttctgggcggcgaaattgcagcgcgctctttggcgtcg
gccattggtgacaaaggcaaggtctacgtctccaacgtcaagcctggagtgtcgacgacg
gaccagcgggagcaagggttcaaatccgagatggccaaacatcccggcatcacggttctc
gaaacgcagttcaatgacaatgacgccaacaaagccgcctctcagcttcaggcggtttac
gcccgcaatccagatttggctggcgtattcggtgctaatctgttttccgggcttggatcg
gcgaacggtgtccagcaggctggtcaatccggcacaatcaaggttgtggctttcgacgcc
ccagggtcagtggtggacaatctgaaatctggccttatcgattttgcaatcgcccagcat
cctgcggaaatcggctattacggggtgatctccgcctatgcgcacctgaccgggcagtcc
atccccaccaagattgggactggctttactgtcatcaacaagagcaacgtgactgatcca
gccgtcgctcggttcatctacgctgaatag
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