Agrobacterium vitis VAR03-1: RvVAR031_40920
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Entry
RvVAR031_40920 CDS
T08810
Name
(GenBank) transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BCH56442
UniProt:
A0A6S6MY13
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Position
2:860394..861383
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AA seq
329 aa
AA seq
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MLNPASHDAIVARQTADRGKRPCSATGTLMLHGRALRYIDEVARQGSIRKAAKTLNVAAS
AINRYILDLEQELDAPIFERLSRGLKLTSSGEILIAHIRETLKAHDTMRVQIKALRGLSR
GEVVIATMATLAAGRLADIIAAYRADIPQVSLRIKVGDRSAVCDMVASGAADLALAYNLP
EDNRLQRAAEFMHPLGAVVAPDHPLATRKTVRIADCLIYPLVLADKTLSLREVVENLTPA
QAQLMPVVETNSMELMKRLVHGAPHVTFLNRVDVDRELQSGELVFLPLTGSAGLQRLNIL
HRARGSLSPAASHFMHYAQERLRMVEDSR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacccggcgagccatgatgccatcgtggccagacagacagcggacaggggcaaa
cgcccctgttctgcgacgggaacgctgatgcttcatggccgcgctttgcgctatatcgac
gaagtcgcccggcagggctcgatccgcaaggcggcaaagacactgaatgtcgctgcctcc
gccatcaatcgctatatcctcgacctggagcaggagttggatgcgccgattttcgagcga
ttgtctcgcggattgaaactgaccagttccggcgaaatcctcattgcccatatccgcgag
acactgaaagcgcatgacacgatgcgggtgcagatcaaggctctgcgtggcctcagccgg
ggtgaggtggtgattgccaccatggcgacgctggcggctggcaggcttgccgacatcatt
gccgcttaccgtgccgatattccgcaggtcagcctgcgcatcaaggtcggggatcgctcg
gcggtctgcgatatggtcgcttcaggggccgccgatctggcgctggcctataatctgccc
gaggataaccgtttgcagcgcgccgctgaattcatgcatccgcttggcgcagtcgttgcg
cccgaccatccgttggcgacacgcaagacggtgcgaattgccgattgcctgatctatccg
ctggtactggccgacaagaccctgtcgctgcgggaggtggttgaaaatctgacgccagcc
caggcccaattgatgcctgttgtcgagaccaattccatggagttgatgaagcggctggtg
catggcgcgccgcatgtcacctttctcaaccgtgtcgatgtggaccgcgaactgcaaagc
ggagaactggtctttcttccgctgaccgggtctgcgggtttgcaaagactgaacattctt
caccgggcgcgtggttcgctctctcccgctgccagccacttcatgcactacgcccaggaa
cggctgcgcatggtggaagacagccgctga
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