Agrobacterium vitis VAR03-1: RvVAR031_41230
Help
Entry
RvVAR031_41230 CDS
T08810
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_41230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_41230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_41230
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RvVAR031_41230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
BCH56473
LinkDB
All DBs
Position
2:898764..899984
Genome browser
AA seq
406 aa
AA seq
DB search
MMTELKFTRRGALGLLAAAPLAGWAGRGRAATQPIKIGLVLTMSGPFASSGQIMANAAKL
YLETEGKAVLGDIPVELVIRDDGGANPDVAKRLVQELVTRDKVQYLGGFQWTPNANAVAP
LLMKAKMPCVLFNAAGANTTQLAPWYARTAFTHWQVNQPLGEWAAASRGFKRAYLLTTDF
APGHDAEEAFTKGFTSKGGAIVASVKMPIQSTNFVPFLLAAKQEKPDVVFAFHPGGVQAS
AFMRAYQEADLRGAGIQLIGPGDLTSDEELPNIGNAALGVITAGQYSMAGDRPANTAFVE
AWKKAYTFLPVRPNYMAVGAYDGMHLICSAIAATKGAVDAAGAMAAMKTFKADQSPRGPI
SIDPETRDIVQNIYIREVREKNGELANVELETIPAVKDPWKVEHPL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaactgaagtttacacgccgaggtgcccttgggttgcttgctgctgcgcca
ttggccggttgggccgggcggggacgagccgccacccagccgattaagatcgggctggtc
ttgaccatgtccggtccgttcgcatcgagtgggcaaatcatggccaatgcggcgaaactc
tatctggagaccgagggcaaggccgtgctgggggatattccggtcgaactcgtcatccgc
gacgacggcggtgccaatccggatgtggccaaacggctggtgcaggaactggtgacgcgt
gacaaggtgcaatatcttggcggcttccagtggacgcccaatgccaatgctgtggctcca
ttgttgatgaaggccaagatgccctgcgtcttgttcaatgcggcgggcgccaataccacg
cagcttgctccctggtatgcgcgcacggcctttacccattggcaggtgaaccagccgttg
ggtgaatgggcggcggcctcgcgcggtttcaagcgagcctacctgctgaccacggatttt
gcccccggccacgatgcagaggaagcgttcacgaaaggcttcacgtccaaggggggagcg
attgtcgcctcggtgaaaatgccgatccaaagcacaaatttcgttccctttctgctcgca
gccaagcaggagaagccggatgtggtctttgcattccatccgggcggcgtgcaggcctcc
gcgttcatgcgggcctatcaggaagccgatctgcgcggcgcgggcatccagttgattggt
ccgggagacctgacaagcgacgaggaattgccgaatatcggcaatgctgcgctgggcgtc
atcaccgctggccaatatagcatggcgggtgatcgcccggccaacaccgcttttgtcgag
gcctggaagaaggcctatacgttcctgcccgtccggcccaattatatggccgtcggcgcc
tatgatggcatgcatctgatctgctcggccattgccgccaccaagggtgcggtggatgcc
gcaggtgccatggccgcgatgaaaaccttcaaagcggatcaaagcccgcgtgggccgatt
tcgatcgaccccgagacgcgcgacattgtgcagaatatctacatccgtgaagtgcgcgag
aagaacggcgagcttgccaatgtggaactcgaaaccattcctgccgtcaaagacccttgg
aaggttgagcatcctctctga
DBGET
integrated database retrieval system
