Agrobacterium vitis VAR03-1: RvVAR031_42020
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Entry
RvVAR031_42020 CDS
T08810
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_42020
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_42020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_42020
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_42020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
BLOC1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
BCH56552
LinkDB
All DBs
Position
2:994306..996228
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AA seq
640 aa
AA seq
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MALFGVFALGVAGYAGMRIMDIDTSYSDLIAQDTAAATAISRANRALQGARSSIAELTIA
RSDKEKAASQQDLQSSRAAFVKFIDIAIAAVPQRRDVADAKTESLRIIDNTCANTIALGN
ASNSPEGVALAQAAFINECQAAFRVITPKNVQLVDDLNNSTDQKSDALSVSSGHAAMVTV
ASIVAGLAIVLTIGFFAIRAWLVIPIRKVAATMETLAGGDLSTDVAGTERRDEVGGMAKA
VQVFKDNGLRARELEREAESVRNSSEAERARVAEMDRKRAEDMAEATSGLADGLKRLSNG
DLGFRLSQPFATEFEALRNDFNAAVAQLSDTLGAVANATSSIDSGSREISQAAEDLSKRT
EQQAASLEETAAALDQITTNVANSSKRAEEARHVAIEANQSARESGIVVSNAVDAMQRIE
QSSNQISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAGAAK
EIKELIRNSAGEVSNGVTLVRATGDALKAIEAHVVTINSQLDAIALSSREQSVGLAEVNT
AVNQMDQVTQQNAAMVEQSTAASSSLASEAGRLRQLISQFHLDGSQTMPASSAAGWTSKK
PAAAHEQHRPVASPARRMVGQVARAMGLQTAAKADSWEEF
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcggtgtgtttgcactgggcgttgcgggctatgctggaatgcgcattatg
gatatcgacacatcctatagcgacctcatagctcaggatactgccgctgcgacagcgata
tcgcgcgccaaccgggccttgcagggggcacgctcgtcaatcgcggaactgacgatcgct
cgctccgacaaagagaaagccgcttctcaacaagaccttcagtcttcgcgggccgctttc
gtaaaattcattgacattgccattgccgcggttccccagcgccgtgatgttgccgatgcc
aagacggaaagtctgcgcatcatcgacaatacctgtgccaataccattgctcttggcaat
gccagcaattcgccagagggcgtggcgctcgcgcaagccgcctttatcaatgaatgccag
gcggcgtttcgcgttattacgccaaaaaacgtgcaattggtggatgatttgaacaattcc
accgatcagaaaagcgatgcattatccgtgagctcaggccatgccgctatggtcacggtg
gccagcatcgtagccggtctggcaatcgtcctgaccatcggctttttcgcaatccgcgct
tggcttgtcataccgatccgtaaggtggctgcaaccatggaaaccttggccggtggtgat
ctttcgacggatgttgcgggaaccgaacgtcgtgacgaagtcggcgggatggccaaggcc
gtgcaagtgttcaaggacaatggcctgcgtgcccgggaactggagcgggaagcagaaagc
gttcgcaattccagcgaagcagaacgggctcgtgttgcggaaatggaccgcaagcgtgcg
gaagacatggcagaggccacatccggcctggcggatggcctgaaacgactgtcgaatggc
gatctcggcttccgtttgagccagccgttcgccaccgagttcgaagcgcttcgcaacgac
ttcaatgccgccgttgcacaattgtccgatacgctgggtgcggtcgccaatgccaccagc
tctatcgatagcggttcgcgggaaatcagccaggctgccgaagatctttcgaagcgcacc
gaacagcaggccgcatcgctggaggaaaccgcagccgcgcttgaccagatcaccaccaat
gtcgccaattcctccaagcgcgccgaagaagcccggcatgtagcgatcgaggccaaccag
tcggcccgcgaatccggcattgtcgtctccaatgctgtcgatgccatgcagcggatcgag
caatcgtccaaccagatctccaatatcatcggtgtgattgatgagattgccttccagacc
aaccttctcgccttgaatgctggcgtggaagcagcacgtgccggggaagcgggcaaaggc
tttgcggtcgtcgcccaggaagtgcgtgaactggcgcagcgctctgcaggtgccgccaaa
gaaatcaaggagttgatccgtaattctgccggcgaagtcagcaatggtgtgacactggta
cgagcgactggcgatgccttgaaggccatcgaggcgcatgttgtcaccatcaacagccag
ctggatgccattgccctgtcgtcacgcgaacaatcggtcggccttgccgaagtcaacacc
gccgtcaaccagatggaccaggtgacccagcagaatgccgccatggtcgagcaatcgacg
gcagccagctcttcgctggcatcggaagcgggccggttgcgtcaattgatttcgcaattc
catctcgacggctcccagaccatgcctgcctcttcggctgctggctggacatccaaaaag
ccggctgctgcgcatgaacagcaccgcccggttgcgtctccggcccggcggatggtgggg
caggtggcccgcgccatgggtctccagacagcggccaaggccgatagctgggaggaattt
tga
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