Agrobacterium vitis VAR03-1: RvVAR031_42120
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Entry
RvVAR031_42120 CDS
T08810
Symbol
glgB1
Name
(GenBank) 1,4-alpha-glucan branching enzyme GlgB 1
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00500
Starch and sucrose metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Module
avf_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
avf_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RvVAR031_42120 (glgB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avf04147
]
RvVAR031_42120 (glgB1)
Enzymes [BR:
avf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
RvVAR031_42120 (glgB1)
Exosome [BR:
avf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RvVAR031_42120 (glgB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
GlgB_N
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
BCH56562
LinkDB
All DBs
Position
2:complement(1010052..1012259)
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AA seq
735 aa
AA seq
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MTIATSDLLSGIDAQAIQALIDGRHGDPFSILGPHRADGETVVRAIFPGALGVEMLDRNS
NAPVGRLNLVHPGGLFAGELRSSSHYRFRIEWPDAVQIAEDPYAFGLLLGDMDLHLIAEA
THYDLARTLGANPREMDGVSGVGFAVWAPTAQRVSVVGDFNSWDGRRNPMRLRQAGGIWE
LFVPGLSPGERYKYELIDAQGTVLPQKADPVAKASEAAPGTASIVASNTPFAWTDQAWMT
RQNADSAAREPISIYEVHLGSWLRIAEDGNRWLDWVELSQRLVPYVKSMNFTHIELLPIT
EHPFGGSWGYQPLGLFSPTGRYGTPEDLAYFIDRCHASGVGVLLDWVPAHFPTDVWGLAR
FDGSALYEHEDPREGFHRDWNTLIYNLGRKEVKGFLIASAFEWLEHFHIDGLRVDAVASM
LYRDYSRNDGEWIPNQFGGRENLESVEFFKHLNSVVHSRCPHALMIAEESTAWPGVTKSP
EDGGLGFDFKWNMGWMHDSLSYIEEDPVYRKYHHGTMTFSMVYQYSERFVLPLSHDEVVH
GKGSLLGKMPGDHWQKLANLRAYYGFMWAHPGKKLVFMGCEIGQDIEWNHDQSISWDLMD
RPGHAGIQTLVAKLNGLYQHEKALQFSDLDPAGFEWAIADDAENSVIAMLRYDENHESCI
LAISNFTPILRHDYRVGVPRQGRWMEILNSDASEFGGSGQGKGDVSAEPHPAHGREFSIN
LALPPLATLYLKWVA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgccacgagcgacttgctatccggcatcgatgcccaggcgattcaagccctg
atcgacggcaggcacggcgatcccttttccatccttggaccgcatcgggcggatggggaa
acggtggtccgggcaatctttccgggtgcgctcggcgtggaaatgctcgacagaaacagc
aacgccccggtgggccgactgaatctggtgcatccgggcggcctgtttgcgggagagctt
cgctcctcctcacactaccggtttcggatcgaatggcctgatgcggtgcagattgccgaa
gacccctatgccttcggcctgctgctcggcgatatggacctgcatctgatcgccgaggcc
acccattatgatctcgcccgcacattgggcgccaatcccagagagatggatggggtatca
ggggttggctttgccgtctgggcgccaaccgcacagcgcgtctcggtggtgggtgacttc
aattcctgggatgggcgacgcaacccgatgcgcctgcgccaagccggtggtatctgggaa
ttgttcgttccgggcctcagtcctggcgagcgctacaaatatgaattgatcgacgcgcaa
ggcactgtgctgccgcaaaaggccgatccggtcgccaaggccagcgaagccgcaccggga
acggcctccatcgtcgcgtccaacacgccgtttgcctggacagatcaggcatggatgaca
cggcagaacgccgattctgccgcccgtgagccgatctcgatctatgaagtgcatctcggc
tcgtggctgcggatcgccgaagatggcaatcgctggctcgactgggtggaactgagccag
aggctggtgccctacgtcaaatccatgaatttcacccatattgaactattgcctatcacc
gaacatccgtttggcggctcctggggttatcagccgctcggcctgttttcacctacagga
cgctacggcactccagaggatttggcctatttcatcgaccgttgccacgctagcggtgtc
ggcgtgcttctcgattgggtgcctgcccattttccaaccgatgtctggggcctggcgcgc
tttgatggtagtgcgctttatgagcatgaagatccgcgcgagggctttcaccgggactgg
aacacgctgatctacaatctcggtcgcaaagaggtgaagggctttctgattgccagcgcc
ttcgagtggctggagcatttccatatcgacgggctgcgggtcgatgccgtcgcctcgatg
ctttaccgcgactatagccgcaatgacggcgaatggattcccaaccaattcggcggacgg
gaaaatctcgaatccgtcgagttcttcaagcatttgaacagcgtcgttcacagccgctgc
ccgcatgcgctgatgattgccgaggaatcaaccgcctggccgggtgtgaccaagtcaccg
gaagacggcggcctgggcttcgatttcaaatggaacatgggttggatgcatgacagcctg
tcctatattgaagaagatccggtctatcgcaaatatcatcacggcacgatgaccttcagc
atggtctatcaatattccgagcggtttgtgctgccgctttcccatgatgaagttgtgcat
ggcaaaggctcgttgctgggtaaaatgcccggcgatcactggcagaagctagcgaatctg
cgggcctattatgggttcatgtgggcgcatcctggcaagaaactggtgtttatgggctgc
gagatcggccaggacatcgagtggaaccatgatcaatcgatctcctgggatttgatggac
cgaccgggccatgctggtatccagactttggtcgccaagctgaacgggctgtatcagcat
gaaaaagctctgcaattcagtgatctcgaccctgccggatttgaatgggcgattgccgac
gatgccgaaaactccgtcatcgccatgctgcgctatgacgaaaaccatgagagctgcatt
ctggcgatttcaaactttaccccgatcttgcgccatgactaccgcgttggcgtgccaagg
cagggtcgctggatggaaattctcaacagcgatgcaagtgaatttggaggctcagggcaa
ggcaagggtgacgtctcagccgagccgcacccggcccatggcagggaattttcgatcaac
ctcgccctgccaccactggcgacactctatctgaaatgggtggcctag
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