Agrobacterium vitis VAR03-1: RvVAR031_42230
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Entry
RvVAR031_42230 CDS
T08810
Name
(GenBank) alpha-mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RvVAR031_42230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avf04131
]
RvVAR031_42230
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
RvVAR031_42230
Membrane trafficking [BR:
avf04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
RvVAR031_42230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
BCH56573
LinkDB
All DBs
Position
2:complement(1028031..1031099)
Genome browser
AA seq
1022 aa
AA seq
DB search
MKTIRKLDSLLTRLADLIFQPLGVSVPLRFRAAHYDERANVLNESREHWVAVTPDHIWGE
PDGYYWFGGEATLPQGVDGQRIVGRIEAAFGNVMGRSDPQCLVRIDGTITQGGDANHREF
LLSPSAKGGQSFDILIEAGTIEDRRQLSFAVSLHRHDLEVEEAYYDMRVPLDVARLLAED
DPRRHFILRTLDGAINAVDFRKGNENRFKASLAKARAITAAIYNAADFEEKPVVVATGHT
HIDVAWLWRVRETRQKMARSMATALALMEEFPDYRFMYNQCVLLDYLADDYPQLFERIRT
HVTTGRFEIEGALWLEPDVNIAGGEALVRHILYGVAYHRKTFGVEPRMVWLPDTFGYSAA
LPQLMRKSGLDSFVTHKLSWNDTNRMPDDKLFWQGIDGSKVVAYFLTTQPYDSKLINTTY
CPNLKPTHVMGTWKRHGQQRLGKELFLVYGHGDGGGGPTREMLHNIRRMERGIPGCPKVE
HGQMRPFFERLIAEMQAHPEDYPTWVGELYLEFHRGTLTSVAKNKRFNRKAEIALRELET
LAMMAERQAGHAYPTQRLRDLWDIIMLNQFHDILPGSSIGAVYEDSDHDYARLFTEAESL
RAELLALLPVNGVDAVLNVTGRHRAGLALIHEPHASGQTLVLADGSKTHAVRLENVPPLS
LSAALPCGPTPPGALDVEPFRLTNRFLDVVFDPKGRILSLHDKVRDRHVFKPGHTANRLQ
AFRDMPAEYDAWDIDSDFEDQSFEIDDLVSAEIVETGPLRAAIRFEWRYEASRIVQVVSL
EAESRKLEFDTFIDWHEHNTLVKTGFPMALNTASIDAEIQFGHVRRATHRNTSWDRARFE
CSMQRWIDVSEPDFGIAFLNDCKYGYDAKGSDIRLTLLRSPTYPWPDADQGEHRLRYAVL
LHDGDKAVVHDAAEDFNMPLQIVVTGKANVVSADRAPPLLSIGTDGITLEAVKQAEASDG
YIVRLWETTGSQRRARIKLGDGITHAALVDLLEENPVAVDMNEEGLDLAFQPFEILTLKL
YR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatacgaaagctcgatagcctgctcacccgactggcagaccttatcttccag
ccacttggcgtttcggtgccactaaggtttcgggcggcgcactatgacgagcgtgcaaat
gtgctgaacgaaagccgcgaacattgggtggcggtgacgccggaccatatctggggtgag
ccggatggctactactggttcggcggtgaagccaccctgccacaaggcgtggatgggcag
cggatcgtcgggcgcatcgaggcggcgtttggcaatgtcatgggccgcagcgatccgcaa
tgcctggtgcggatcgatggaacgatcacccagggcggcgatgccaaccaccgggaattc
ctgttgtcaccgtcagccaagggcggccagagcttcgacatcctgatcgaagcggggacg
attgaggatcggcggcaactcagctttgccgtcagcctgcatcgccatgacctagaggtt
gaagaggcctattacgacatgcgcgtgccgctcgacgtggcccgcctgctggcagaagac
gatccgcgccgccatttcatattgcgcacgctggacggtgccatcaacgccgttgatttt
cgaaagggcaatgagaacaggttcaaggcctcacttgccaaggcacgggccatcacggcg
gccatctacaatgccgctgatttcgaagaaaagccggtcgtggtggcaaccggccacacc
catatcgatgtcgcctggctctggcgggtgcgggaaacccggcagaagatggcccgatcc
atggcaaccgcccttgccctgatggaggaatttcccgattaccgcttcatgtataaccaa
tgcgtgctgctggattatctggctgacgactatccgcaattgttcgagcgcatccgcacc
catgtgacgaccgggcggtttgaaattgaaggggcgctgtggctggagcctgacgttaat
atcgctggtggcgaggcgctggtacgtcacatcctctatggcgtcgcctatcatcgcaaa
acctttggcgtcgagccgcgcatggtctggttgccggacacgttcggctattcggcagcg
ctgccgcaattgatgcgcaaatccggcctcgacagtttcgtcacccataaactgtcctgg
aacgacaccaaccggatgcctgatgacaagctgttctggcagggtattgatggcagcaag
gtggtcgcctacttcctgacgacgcagccctatgattccaagctgatcaacaccacctac
tgccccaacttgaagccgacccatgtgatgggcacctggaagcgccatggtcagcaacgg
ctcggcaaggaactgttcctcgtctacggccatggcgatggcggcggcggcccaacccgg
gaaatgctccataatatccgccggatggagcgcggcatccccggctgcccgaaggtggaa
catggacagatgcggcccttctttgaacggctgatcgcggagatgcaggcccatcccgaa
gactatccgacctgggttggcgagctttacctggagtttcatcgcggcacgctgacctcc
gtcgccaagaacaagcgctttaaccgcaaagccgaaattgcgcttcgggaattggagacg
ctggcgatgatggctgagcggcaggctggtcatgcctatcccacacagcgattgcgcgac
ctgtgggacattatcatgctcaaccagttccacgatatcctgccgggatcatcgattggc
gcggtctatgaagacagtgatcacgattacgccaggctatttaccgaggctgaaagcctg
cgcgccgaactcctggcgctgttgccagtcaatggcgtcgatgccgtgttgaatgtgacc
ggtcgccatcgcgccggtctggctctgatccatgaacctcatgcctcgggccagaccctg
gttttggcggatggatcgaaaacccacgccgtccggctggaaaacgtgccgccgctgtcc
ttgtccgccgccctgccctgcggcccgacaccgcccggtgctttggacgtagaaccattt
cggcttaccaaccgctttctggatgtggtgttcgaccccaaaggtcgcatcctgtcactg
catgacaaggtgcgagaccgccatgtcttcaagcccggccacacggccaatcgcctccag
gccttccgggacatgcctgcggaatatgacgcctgggatatcgatagcgatttcgaagac
cagagtttcgagatcgatgatctcgtcagcgccgagatcgttgaaaccgggcctttgcgc
gccgcaatccggttcgaatggcgctacgaggcgtcgcggatcgttcaggtcgtttcactg
gaagccgagagcaggaagctggaattcgatacgttcatcgactggcatgagcacaatacg
ctggtcaaaaccggcttcccgatggcgctcaacaccgcgtcaattgatgcggaaatccag
ttcggtcatgtccgccgcgccacgcaccgcaatacctcctgggaccgcgcccggttcgaa
tgctccatgcagcgctggatcgatgtcagcgaaccggatttcggcatcgccttcctcaac
gattgcaaatatggctatgacgcaaagggcagcgatattcgcctgaccctgctgcgctcc
ccaacctacccctggccggacgccgaccagggcgagcatcgcctgcgctacgccgtgctg
ctgcatgatggcgacaaggccgtggtgcatgatgccgcagaagacttcaacatgccgttg
cagatcgtcgtgaccggaaaggctaatgttgtctcagcagatcgagccccgccactgctg
tcgataggaacagatggcattacgctggaagcggtgaagcaggcagaggcaagtgatggc
tatatcgtccgcctctgggaaaccaccggaagccagcgtcgcgcgcggattaaactcggc
gacggaatcacccatgccgctcttgtcgatctgctcgaggaaaatccggtggcggtagac
atgaacgaggaagggctggatcttgccttccagcccttcgaaattctgacactgaagctc
tacagatag
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