Agrobacterium vitis VAR03-1: RvVAR031_42260
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Entry
RvVAR031_42260 CDS
T08810
Name
(GenBank) sugar ABC transporter permease
KO
K25677
pectin-derived oligosaccharide transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_42260
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Pectin-derived oligosaccharide transporter
RvVAR031_42260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BCH56576
LinkDB
All DBs
Position
2:1034251..1035216
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AA seq
321 aa
AA seq
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MNTTRDGMAGTSGAAPVMQPISTPSPFRASLARNAPGYLFLLPWFIGFFVLTLGPALFSF
WLSLTDYNLLQSPNVVGLDNYIRIATADEKFMSSMRVTLVYVVLSVPLKLTFALLVALLL
NKGIRGLPLYRAVFYLPSLLGSSVAIAVVWRQLFDGDGAINVLLWNSFGIEGPSWISNPD
YSLYTLVILAVWQFGSPMIIFLAGLRQIPVDMYEAASLDGASKVRMFFKITLPLLTPVIF
FNAVVQTIDAFKAFTPAYVISSGTGGPIDSTLFYTLYLYQEAFGYFRMGYAAALAWILVI
IIALFTAFSFLSSRYWVHYDD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaccactcgtgatggaatggccggcacctctggtgccgcgccagtgatgcagcct
atctcgacaccgtcgccgttcagggccagtctggcgcgcaatgcgccaggctatctgttt
ctcctgccctggttcatcggcttttttgtactcacgctcggcccggcactgttttccttc
tggctgtcgctgacggactacaatctgctgcaatcgcccaatgtcgtcggcctggacaat
tacatccgcatcgccacggctgacgaaaaattcatgtcctccatgcgggtgacgctggtt
tatgtggtgctgtctgtgccgctgaaactgaccttcgccctgctggttgccctgctgctc
aacaagggtattcgcggcctgccgctctaccgggcggtcttctacctgccatcgcttctg
ggctccagcgtcgcgattgctgtggtctggcggcaattgttcgatggtgacggggcgatc
aacgtgctgctttggaatagctttggcatcgaagggccaagctggatctccaatcccgat
tactccctctatacgctggttattctggcggtctggcaattcggttcgccgatgatcatc
ttcctggccggccttcggcagatcccggtcgatatgtatgaggcggctagtctggatggc
gcttccaaagtgcggatgttcttcaagatcaccctgcctttgctgacgccggtcatcttc
ttcaatgccgtggtccagaccatcgatgccttcaaggcctttacgccagcctatgtgatc
tcgtcaggcaccggcggccccatcgattccacgctgttttatacgctctatctctaccag
gaagcctttggctatttccggatggggtatgcggcagcccttgcctggatcctggtgatc
atcatcgcgctgttcacggccttttccttcctgtcctcgcgctattgggtgcattacgat
gactga
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