Gillisella vitis VAR03-1: RvVAR031_42530
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Entry
RvVAR031_42530 CDS
T08810
Symbol
afuC
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
avf
Gillisella vitis VAR03-1
Pathway
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_42530 (afuC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_42530 (afuC)
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAR031_42530 (afuC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
ABC_ATPase
SMC_N
AAA_29
AAA_16
AAA
AAA_22
RsgA_GTPase
nSTAND_NTPase5
SbcC_Walker_B
nSTAND1
AAA_33
NACHT
AAA_25
CysA_C_terminal
Zeta_toxin
AAA_5
ORC-CDC6-like
AAA_23
OB_MalK
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BCH56603
LinkDB
All DBs
Position
2:complement(1067350..1068432)
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AA seq
360 aa
AA seq
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MAQLTLDRVSKQFPGSTAVDAFSLHVEDGELVCLLGPSGSGKSTLLRMIGGFEAPTSGVI
RIDGQDVTRLPPERRPTGMVFQSHALWTHMNVFKNIAFGLKLRGMAKSEIADRVEAALAM
VGLKDYGQRQTYQLSGGQQQRVALARSLVLEPKILLLDEPFASLDQHLRERLREEVRDIQ
QRLGITTLFVTHGQDEALALADRIVVMRTGRAEQIAPPDRVYREPETEFVAGFIGQMNFI
PGMMRRGAFTHIDLSLAVDTDSNPEDGDAVLAVRPEALHLSPTDRADAAFVCRAIDFGSH
LMVDLQLGDGTRVKAMTDPGTGWQKGDRAELQVRAFRVFRDNKVVCVSRTADRLRSLANV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgacccttgaccgcgtttcaaaacagtttcccggctcgaccgctgtcgat
gcgttctcgttgcatgttgaagatggcgagctagtctgcctgctcggcccgtccggatcg
ggcaaatcgacgctgctgcggatgattggcggatttgaagcgccgaccagcggcgtgatc
cgcattgacggccaggacgtgacccgtctgccgccggaacggcgaccgacgggcatggtc
tttcaaagccacgcgctctggacccatatgaatgtgttcaagaacatcgcgttcggcctg
aagctgcgcggcatggcgaaaagcgaaatcgctgaccgggtcgaggcagcgctggccatg
gtcgggttgaaggactacggccagcgccagacctatcaactctccggcggccaacagcaa
agagtggccctcgcccgctcgctggtgctggagccgaaaatcctgctgctcgatgaaccc
tttgccagcctcgaccagcatttgcgcgaacgactgcgcgaggaagtacgcgacattcag
cagcggcttggtatcaccaccctgttcgtcacccatggacaggacgaagctttggcattg
gccgaccgcatcgtcgtgatgcggactgggcgcgccgagcagatcgccccgccagaccgg
gtttaccgcgagccggaaacagaattcgttgctggctttatcggccagatgaatttcatt
cccggcatgatgcgccggggcgcattcactcatattgacctttccctggcggtcgatact
gatagcaatccagaggatggcgatgcggtgctggccgttcgtccggaagccctgcatttg
tcgcccaccgaccgggcggatgcggcctttgtctgccgggccatcgattttggcagccat
ctcatggtcgatcttcaactcggcgatggtacacgggtaaaggccatgaccgatccggga
accggttggcaaaaaggcgaccgtgccgaattgcaggtcagggctttccgggtgttccgc
gacaataaggtggtctgcgtgtcccggaccgccgatagattaaggagtctggccaatgtc
tga
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