Agrobacterium vitis VAR03-1: RvVAR031_pl00560
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Entry
RvVAR031_pl00560 CDS
T08810
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02030
polar amino acid transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl00560
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Putative polar amino acid transporter
RvVAR031_pl00560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
NMT1
HNF_C
Motif
Other DBs
NCBI-ProteinID:
BCH56725
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All DBs
Position
pRvVAR031a:complement(85490..86425)
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AA seq
311 aa
AA seq
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MEHAFFRSARMLAAGALTLLVSAPVHAQQFDLGPEQPGRLHTQKDPKAASALPKDFKFAR
AGVLTVAVAVGAPPITAYATDAKTVIGFDPDLASLVAESLGLKLELLSVAWADWPLGLTS
GKYDAVISNVGVTEQRKRKFDFSTYRQGLHGFYVKKDGPITSIKEPKDVAGLRIIVSSGT
IQERILLEWDKQNTANGLKPLELQYYDDDAAADLALQSGRADANLGPNAVQAWQAATLGR
KRLVGTINAGWPLTVEVGVTTRKGSGLAEPISIAIDGLIASGQYQATLSRWNLTPEGLQA
SKVNPPGLPAN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgctttcttccgctcagctcgaatgctggcagccggtgccttgacacttttg
gtctcagcgccggtgcatgcccaacagtttgatctcggccctgaacagccgggccgactg
catacgcaaaaagatccgaaagcggcttcagcccttccaaaggatttcaaatttgcccgt
gccggagtgttaacggtggccgttgctgtcggcgctccaccgatcacagcctatgcgacg
gatgcgaaaacggtgatcggttttgatccggacctcgcctcgctggtggcagagagtctt
ggcctgaagctggaacttctgtctgtcgcgtgggctgattggccactgggcctcacctct
ggcaaatatgatgccgtgatttcaaacgtcggtgtcaccgaacagcgcaagcggaaattc
gacttctccacatacagacagggactacacggcttttacgtcaaaaaagatggtccgatc
acgtccattaaggagccaaaggatgttgccggcctgaggatcatcgtcagttcgggtacc
attcaggagcggattctgctggaatgggacaagcaaaacacggcaaacgggctgaaaccg
cttgaactgcaatattacgatgacgatgcagccgctgatctggctctgcaatccggtcgg
gctgacgccaatcttggcccgaatgccgtgcaggcatggcaggcagcaacccttggccgc
aagcggttggtgggaactatcaatgccggctggccattgacagttgaggtgggcgtgacg
actcgaaaaggcagcggattggcggagccgatcagcattgccatcgacggtctgatcgcc
agcggccaatatcaggcgacgctgtctcggtggaatctgacaccggaaggcctgcaagcc
tcaaaagtcaatcctccaggtctgcctgccaattga
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