Agrobacterium vitis VAR03-1: RvVAR031_pl01160
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Entry
RvVAR031_pl01160 CDS
T08810
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02004
putative ABC transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl01160
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
RvVAR031_pl01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
FtsX
Motif
Other DBs
NCBI-ProteinID:
BCH56785
LinkDB
All DBs
Position
pRvVAR031a:144679..145878
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AA seq
399 aa
AA seq
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MTFNLRQSLVMVRANIYSLPRRLPISLSMILSVALVVCVLAGFLSMARGFEKTLRSTGSP
SVAVVLGGGTNQETGSDIPPSVIRTLEAKISDIGVARSSDGALMLSREIVVTVDVKPGKA
AAGRTIALRGMDAAGMSIRDNISLSTGRPFKSGAREIVVGDRFARELGLHTGDAVRLGTV
NWTVVGQFSAQGSAFESEIWADLDAIRSAFDRQGQVQSLRLRLFSPTSLPALQNELAIIT
TTPLIAVSETDLYAAQSGRTASLIRLFGWPLAVLMAIGATAGALNTMMNSVSDRKVEIAT
FRALGFTRLSTFIGTWIEAVLLAAIGAISGLAISWLVFNGWQASTIGANDAGMAFQLAVT
SDVMLVAGALGLTIGIVGGALPAITATRLPIATALRSNR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgactttcaacctccggcagtcactggtgatggtgcgggcgaatatctatagtttgccg
cgacgtctgccgatttccttatcgatgatcctttcggtcgcgttggtcgtttgtgtcctc
gctggctttctatccatggcaaggggtttcgaaaaaactctgcggagtacaggatcgcct
tctgttgcggttgtcctcggcggtggtaccaatcaggagacaggttccgatatcccacca
tccgttatccgcacgctggaagctaaaataagcgatataggtgtcgcacgcagcagcgac
ggtgcgctcatgctctctcgtgagattgtggtgaccgtggatgtcaagcctggcaaagct
gcggccggacgaacaatcgcattgcgtggcatggacgcggctggaatgtcgatccgcgat
aatatttcgctgtctacagggcggcctttcaaatccggcgcgcgcgagattgtcgttggt
gatcgctttgcccgggagttgggattacatacgggtgatgcggttcggctcgggacagtc
aactggaccgttgtcgggcaattctccgcgcagggcagcgccttcgaatccgaaatatgg
gccgatctggatgcaattcgttcagcgtttgatcgtcagggacaagtccaaagcctacga
ctacgcttgtttagcccgacatcgcttccagctcttcaaaacgaactcgcaataataacc
acaacgccgctgatcgctgtttcggaaactgatctttatgcggcacaatcgggccgaaca
gccagcctgatacggctgtttggctggcctcttgcagtcttgatggcaatcggcgctaca
gcaggtgcgttgaataccatgatgaattccgtttctgatcgtaaggtggaaatcgcaacg
ttcagagccttgggttttacccgtctctcgacattcatcggaacttggattgaggccgtt
cttcttgctgcaatcggtgcgataagtggactggcaatttcatggctggtcttcaatgga
tggcaagccagcacgatcggcgcgaatgacgctgggatggcatttcagttagcagtcacc
agcgacgtcatgctcgtcgcgggagcactagggcttacaatcggcatcgtaggtggagcg
ttaccagcgatcactgccacaaggcttcctatagcaacggctctaaggtcgaacagatag
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