Agrobacterium vitis VAR03-1: RvVAR031_pl01590
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Entry
RvVAR031_pl01590 CDS
T08810
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_pl01590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_pl01590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl01590
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RvVAR031_pl01590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
BCH56828
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All DBs
Position
pRvVAR031a:complement(188491..189744)
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AA seq
417 aa
AA seq
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MSKHYLTGAAVIGALFFMAGTASAAATCGLNNGKKATGEPIKVGAVIGQTGPDDFSSASK
AAQAYFNCVNENGGINGRPINYLVKDDQWNPETAAQVATKLVKDEKVVALVGSASFVEMG
VNAKLYEQEGVMSMASGCAVAECFESKNIVSTNEGPMPSSVGAAQWAVANLQSKHVTCIG
LTIPTVGQYSCGWTEKYMTSKGLKGSSVLIDPSTADMNSAFLEAVAGGPDTILVNLPAGM
AAAFLSVALQSGQRDSFKWISSTPLYDRDVPALLGDAWSGVMYVNTELTPIDGTGPDANN
WRAILDQYGAKSDPRDTFSQAGYLSARFFTDAILKLDPGKINRATVTDAIRAIKNEKSDL
LCGPYYVGDGDRHMPNHANMMVQFVNGGYKVVGPCADVDSAYLEPYRAQEKALGITN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcattatctcaccggagccgccgttatcggtgcgctgtttttcatggcagga
accgcatctgcggcagcaacctgcggccttaacaatggcaaaaaagccacgggcgagccg
atcaaggttggcgctgtgatcggccagaccggaccggacgatttttcgtccgcatccaag
gccgctcaggcctattttaactgcgtcaacgaaaacggcggcatcaacggacgacccatc
aattatctcgtcaaggatgatcagtggaaccccgaaaccgccgcgcaagtcgccaccaaa
ctggtgaaggatgaaaaggtcgtcgctttggtaggctccgcatcctttgtggagatgggt
gttaacgccaaattgtatgagcaggaaggcgtgatgtcgatggcatccggctgtgctgtt
gccgaatgctttgaatcgaaaaatatcgtttcgaccaatgaagggcctatgccctccagt
gtcggagccgcgcaatgggcggttgccaatctgcaatccaaacatgtcacctgcattggg
ctgaccattccaaccgttggtcaatattcttgcggctggacggaaaaatacatgacgtcc
aagggactcaaaggctccagcgttctgatcgatcccagtacggcagatatgaattccgct
tttctcgaagcggtggccggcggtccggacaccattctggtcaatctgccagcgggtatg
gcagcggcgtttctgtcggtcgcattgcagtctggccagcgggattccttcaaatggata
tcctcaacgccgctttatgatcgggatgtgccagctcttctcggcgatgcatggtccggg
gtgatgtatgtcaatacggagctgacaccgattgacggcactgggccagatgccaacaat
tggcgggccatccttgatcaatatggtgccaagagcgatccacgcgatacgttcagccag
gcgggctatctctcggcccggtttttcaccgatgccatattgaagcttgatcccggtaag
atcaaccgcgccaccgtgacggatgcgatccgggccatcaagaacgagaaatcggatctt
ctgtgcggaccctattatgtcggcgatggggatcggcatatgcccaaccacgccaatatg
atggtgcagtttgtcaatggcggttacaaggttgtcggcccctgtgctgatgtcgatagc
gcctatcttgagccttaccgcgctcaggaaaaagcgctcggcatcaccaactga
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