Agrobacterium vitis VAR03-1: RvVAR031_pl01670
Help
Entry
RvVAR031_pl01670 CDS
T08810
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_pl01670
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_pl01670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl01670
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAR031_pl01670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
BCH56836
LinkDB
All DBs
Position
pRvVAR031a:complement(198617..199681)
Genome browser
AA seq
354 aa
AA seq
DB search
MKTMIKMSLATGLAASFLFSAAFAQQLAPLNSDTEKDRMDWSQLEAKFGPFPKLPDGTKA
GAVSKTLTNEYWRSLGEGYAAFGKAKNVPVAYQAAQSEGDQLGQLTIAEGMITQGYNVLL
VSPQTDSNLQPVIEQAKAANIPVVDVNDAVIPQAEHYVGNVQRDNGVRVAKWFITNRPQG
GKVAIIEGQAGVYAAVQRTDGFKSTIGENSKFKVVASVPGNWDRQTSYDAATNILNQHPD
LIGFYANNDGMALGVVEAVKAAGLAGKVAVFGTDGISDAYASIKAGELTGTVDSFPILTG
EVAMETALRLVAGQKLPRVVATPQALITADNLARYQGKGVDVRAVLMEDAKAAK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccatgataaaaatgtcgcttgccacaggccttgctgccagcttcctgttcagc
gcagcctttgcgcagcagcttgccccgctcaattccgacactgaaaaagaccgcatggac
tggtcgcagctggaagcaaaattcggcccctttccgaagcttcccgacggcaccaaggcg
ggcgctgtttcaaagacattgaccaacgaatactggcggtcgctcggtgagggctatgcg
gcgttcggcaaggcgaagaatgttccggtcgcctatcaggcggcgcaaagtgaaggcgac
cagcttggccagctgacgattgccgaggggatgatcacccaaggctataacgtcctgctg
gtgtcgccacagacggattccaatcttcagccggtgatcgaacaggccaaggccgccaat
attcctgttgttgacgtcaatgatgccgtgatcccccaggccgagcactatgtcggcaat
gtccagcgcgacaacggcgtgcgcgtcgccaaatggttcatcaccaatcgtccgcagggc
ggcaaggtggcaatcattgagggtcaggcaggcgtttatgccgctgtgcaacgcaccgac
ggcttcaaatccaccatcggcgaaaacagcaagtttaaggtggttgctagcgttcccggc
aattgggaccgccagacgtcttacgatgccgcaaccaacatcctcaatcagcatccagac
cttatcggcttctatgccaataatgacggcatggcgctgggtgtggtcgaagccgtcaag
gcggcagggcttgcgggcaaggtcgctgtttttggcaccgacggtatttcggatgcctat
gcctcgatcaaggctggtgaactgaccgggaccgtcgacagctttccgattctaacaggt
gaggtggccatggaaacagcccttcggctcgttgcaggccagaagctgccgcgcgttgtc
gcaacgcctcaggcgctgatcaccgcggacaacctcgcccgctaccaaggcaagggcgta
gatgtgcgcgccgtgctgatggaagatgccaaggctgccaaataa
DBGET
integrated database retrieval system
