Agrobacterium vitis VAR03-1: RvVAR031_pl02050
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Entry
RvVAR031_pl02050 CDS
T08810
Name
(GenBank) hypothetical protein
Organism
avf
Agrobacterium vitis VAR03-1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
HTH_24
HTH_11
HTH_23
HTH_IclR
Sigma70_r4
HTH_3
NUMOD1
HTH_31
HTH_38
HTH_AsnC-type
MerR
HTH_7
Phage_NinH
HTH_Tnp_Tc3_1
Motif
Other DBs
NCBI-ProteinID:
BCH56874
LinkDB
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Position
pRvVAR031a:complement(241481..242353)
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AA seq
290 aa
AA seq
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MNRRWHFREHLSIREIGRRTGLSRNTIRKYLRVDGGEPKFKVPERPSKLDPFADRLSAWL
RTEAKKPRKQKRTAKQLHAELVSLGYQGSYNRVASFARERKADLQRELQTTGRGTFVPLA
FDPGEAFQFDWSEDWAIIGNERTKLQVAHTKLSYSRAFIVRAYLLQTHEMLFDAHNHAFR
VFGGVPRRGIYDNMRTAIDKIGRGKERDVNIRFMAMASHYLYEPEFCNPASGWEKGQVEK
NVQDARHRFFQPTPRFPSLETLNDWLELRCREIWADRTWKDARYHRRSLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccgacgctggcattttcgagagcatttatcgatccgggagattggccgcaggacc
ggcctgtcccggaacaccatccgcaaatatctgcgtgttgacggcggggagccgaagttc
aaggttccggagcggcccagcaagctcgatccgtttgcggatagactgtcggcttggcta
aggacggaagccaagaagccgcgcaagcagaagcgaaccgcaaaacagttgcatgctgag
ctggtgagccttggttatcagggttcctacaatcgtgttgcctccttcgcccgggagcgg
aaagccgacctgcagagagaattacagaccacagggcgcgggacattcgtgccgctggcg
ttcgatccgggcgaagcgttccagttcgactggtcggaagattgggcgattatcggcaat
gaacgcaccaagctgcaggtggctcataccaagcttagctactccagggctttcatcgtg
cgggcctatctcctgcagacgcacgagatgctgttcgatgcccacaatcatgcattccgt
gtcttcggcggtgttccccggcgcggcatctacgacaacatgcgcacggcgatcgacaag
atcggacgcggcaaggaacgggacgtcaacatccgcttcatggcaatggccagccactac
ctttacgaaccggaattctgcaacccggcatctggctgggagaagggtcaggtcgagaag
aacgtgcaagacgcgcgtcaccggttctttcaaccgaccccacgctttccgtcactggaa
accctgaacgattggctggagcttcgatgcagggagatttgggcagaccgcacatggaaa
gatgcgcggtaccatcgccgatctctgggctga
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