Agrobacterium vitis VAR03-1: RvVAR031_pl02490
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Entry
RvVAR031_pl02490 CDS
T08810
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00020
Citrate cycle (TCA cycle)
avf00630
Glyoxylate and dicarboxylate metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01120
Microbial metabolism in diverse environments
avf01200
Carbon metabolism
avf01210
2-Oxocarboxylic acid metabolism
avf01230
Biosynthesis of amino acids
Module
avf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
avf_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
avf_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RvVAR031_pl02490
00630 Glyoxylate and dicarboxylate metabolism
RvVAR031_pl02490
Enzymes [BR:
avf01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
RvVAR031_pl02490
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-ProteinID:
BCH56918
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All DBs
Position
pRvVAR031a:285805..286905
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AA seq
366 aa
AA seq
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MSAKPAFIHENSAPGLDNVVAAETILSYVDGQAGDLIIRGHHLKDLAQWSFEQVLELLWA
ELTPESVTARDIREQLGSARQRAFELMQPLLPALPDVSSVEALRLLLSALPDNERIPHYI
MAVAAVPVFASTIIRSRQELAPIAPDVSLGHSEDFLRTVSGAVPSAQKVRALDTYLTTVA
DHGLNASTFTARVIASTGAGLFSSVVGALCALKGPLHGGAPGPVLDMLDAIGDDARIEPW
LNDALARGERLMGFGHRIYRVRDPRADVLKGAVSALKDGSSRIAFAGKVEEAALALLKEK
KPLRPLQTNVEFYTALVLEAVGFPRDSFTNVFAAGRMAGWTAHVLEQERTGRLIRPQSRY
IGPQPR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaagcctgcttttattcacgaaaattcggcgcccggccttgataacgtcgta
gcggctgaaaccatcctcagctatgttgatggccaggcgggtgatctgatcattcgcggc
catcatctaaaggatctggcgcagtggtcttttgaacaggtgctggagcttctttgggct
gaactgacaccggaatccgtgacagcgcgggatatccgtgagcaactcggaagtgcgcgg
cagcgcgctttcgaactgatgcagcccctacttccggccctacctgatgtttcttccgtc
gaggctttacgccttttattgtcggctctgccagataacgaacgaatcccacattatata
atggctgtcgcagctgtaccggtctttgcctcgactatcatccgcagcaggcaagagctt
gcgccgattgcgccggatgtctcgctaggccattcggaagatttcctgcgcacggtatcc
ggtgctgtcccttctgcgcagaaggtgcgggcgcttgacacgtacttgaccacggttgcc
gatcatggactgaacgcctccacgtttaccgcccgggtgattgcgtcaacaggggctgga
cttttttcatcagtcgttggtgcactttgtgccttaaagggtcctcttcatggcggcgca
ccgggaccggtgcttgatatgttggatgcgattggagatgatgcaagaatcgagccgtgg
ttgaacgatgcattggcgcgcggggagcgcctgatgggcttcggccaccggatataccgt
gtacgtgacccccgtgccgacgtgctgaagggcgccgtatccgctctcaaggacggttcc
agccggattgcctttgcaggcaaagtagaagaggcagccctggcgcttctcaaggagaag
aaaccacttcgcccgctacaaaccaatgtggaattctacactgcacttgtgttggaagcc
gtcggtttcccgcgtgacagtttcaccaatgtgttcgcggcaggacggatggcaggctgg
acagcccatgtattggagcaggagagaacgggacggctcatccgcccacaatcccgctat
atcggcccgcagccgaggtga
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