Agrobacterium vitis VAR03-1: RvVAR031_pl02610
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Entry
RvVAR031_pl02610 CDS
T08810
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_pl02610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl02610
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAR031_pl02610
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BCH56930
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All DBs
Position
pRvVAR031a:complement(298455..299270)
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AA seq
271 aa
AA seq
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MLLSSRRHDVFGLLILLFLIVFIVLPVLTVFLWAFAEQWFYPSVLPTKWGFRFWSAVLAR
PDVWAALWTSVELSLTVTLLSAIICLPAAYAFARMDFPGKSVFMLSFLMANAFPRFALII
SIAVLFLSFNLVGTFTGVVIIQLLNTLLLMIWLPTAAFRAVSRDMEEAARDVGANRWQVF
RHITLPQAFPTIAAALLMTFVWTFYETEGAWLVGAPRIRTMPLLMMSMINNQLVVQYGAV
LSVMLWVPSLAAILMARRVIGGEAFAKGLGG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtccagtcgccgccatgatgtgttcggcctgcttattctgctgtttctgatt
gttttcatcgttctgcccgtgctgacagtttttctctgggcctttgccgaacaatggttt
tatccctctgttctgcccaccaaatggggctttcgcttctggtctgcggttttggcccgc
ccggatgtctgggcggccctttggacgtcggttgagctgtcgctgaccgtcacgttgctg
tccgctatcatctgcctgcctgcggcctatgcctttgcccgcatggattttccgggaaaa
tcggtgttcatgctgtcgtttttgatggccaatgcctttccgcgctttgcactgattatc
tccatcgcggtgctgtttttatccttcaatctggtgggcacctttaccggtgtggtgatt
attcagctgttgaataccttgctgttgatgatctggctgccaacggcggcgtttagagcc
gtcagtcgggatatggaagaagccgcccgcgatgtcggtgcaaaccgctggcaggtgttt
cgccacatcaccttgccgcaggcctttcccaccattgccgccgctttgctgatgaccttc
gtttggaccttttacgagacggaaggtgcctggctggtgggtgcgccgcgcattcgcacc
atgccgctgttgatgatgtcgatgatcaacaatcagttggtggtgcaatatggggctgtg
ctgtcggtcatgctctgggtgccgtctctggccgccatcctgatggcgcggcgggtgatt
ggcggcgaggcttttgccaaagggctgggcggatga
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