Agrobacterium vitis VAR03-1: RvVAR031_pl02640
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Entry
RvVAR031_pl02640 CDS
T08810
Name
(GenBank) alpha-mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RvVAR031_pl02640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avf04131
]
RvVAR031_pl02640
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
RvVAR031_pl02640
Membrane trafficking [BR:
avf04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
RvVAR031_pl02640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro_57
Glyco_hydro38C2
Motif
Other DBs
NCBI-ProteinID:
BCH56933
LinkDB
All DBs
Position
pRvVAR031a:301717..304803
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AA seq
1028 aa
AA seq
DB search
MRAYRDRQRSLEQLSRHIEVWADELEAYELRKRMSLGAFLGSTREGLTTRMGVGDAWPNR
HGIHTFLLEDAIVVPEGPDVELRLDFGGESLVRLMGLDGEILESFAANPCHRRFDVPRGI
PFKIKAESAARSLFGVPNRNPVLSMAEIYGYYPEIRALRRRLLILRNTADTVKDKELART
LYEAAEIALSGLRLPTATQDVGPRLASRTWARDIWERSFEPTDAPQALTQEALASVETAT
VRLDAMLTELRHTYPKQGRVLVTGHAHIDYAWLWPQPETVRKIVRTFNSVNALLKRHDDF
RFLQSSSLYYQHVEQEDPALFEEIKQRVSEGRWEVIGGMLVECDTNMPSAEAFLRQFLHG
QRYFQKHFGITSRTAWLPDTFGFTAAMPQIMRHAGIDTLVTIKVSWNETNSLPDNLFRWQ
GNDGSRVLVHTFDAYDNDGYNMLMTPAALCEVWGKHAAKDMTDTVIASYGWGDGGGGPDP
DQIETLPLLNLMPAIPTVEHGAIEPHIQALASDLEAAALPIWRGELYLEYHRATLTTQAR
TKQLNRQAETALVAAEAISVLDALEGGTPAANTLEPQWELLLRNQFHDILPGSSIREVYQ
QTEPELEGVIDDATTLIQTRLQAIAARYSGDLDGLLVANLSGSPKTAFQIESARPVPAAL
QAQELNGHYVAAIERDLKPLSLGFISAASQRRVTTDGKTLENDFVRLALDEAGRMISLID
KRSDRELMDGPGNQLLLYRNDLPRNFDAWDIEPGFELGEEEWLSLETLEVTANGPHLAEI
TITRRFSASTIQQKIRLWSNSPRVEFVTDLDWHDRRTYLRAAFPVTVLAEDAVFDQAIGI
TRRPTHDNTSWQKAQFESCGHRFVSLSETDWGAALLSADKYGFSAKGNRLTLSLVRGPMF
PDMLADEGHHHFVYALLPHDGRWWSEEVQAEADLVNAGLHFTPSTTTENYDITPIGFSGQ
SVRVHALKPAEDGKGHVLRLSESAGRRGVFHLALPGGRKPTLINAIEVPLDDLDDPLSRP
FGLASFLF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcctatcgagatcgccagcgtagccttgaacagctttcgcgtcacatcgaagtc
tgggccgatgaactggaagcttacgagctgcgcaagcgcatgtcacttggggcgtttctt
ggcagcacacgggagggcctgacgacgcgcatgggcgttggtgatgcctggccaaatcgc
catggcattcacacgtttctgctggaagacgcaattgtggtaccggaaggcccagatgtg
gaactgaggcttgattttgggggtgaaagccttgtccgcctgatgggtctggatggcgaa
attcttgagagttttgctgccaacccctgccatcgcaggtttgatgtcccgcgcggcatt
cccttcaaaatcaaagcggaatccgccgcgcgcagtctgtttggtgtgcccaatcgcaac
cccgtgctctccatggccgagatttatggatattatccggaaattcgcgccttgcgccgt
cgcctgctgattttgcgcaacaccgccgatacggtgaaggacaaggagcttgcccgcacg
ctctatgaagcggcagaaattgccctttcaggcttgcggctgccgacagcaacgcaggat
gtcggaccgcgtctggccagccgcacttgggcgcgcgatatatgggagcgcagttttgag
cccaccgacgccccgcaagccctgacacaggaagccctcgcttctgttgagacggcaacc
gtcaggcttgatgccatgctgactgagcttcgacacacctaccccaaacagggacgtgtg
ctggtgaccggtcacgcccatattgattatgcctggctttggccgcagccggaaacggtg
cgaaaaatcgtgcgaaccttcaatagcgtcaacgcattgctcaagcgccacgatgatttt
cgttttctgcaatcgtcctccctctactatcagcatgttgagcaagaggacccggcgctg
tttgaagagatcaagcagcgcgtctcggaaggccgttgggaagtcatcggcggcatgctg
gtggagtgcgataccaacatgccctcggcagaggcgtttttgcggcagtttctgcatggg
cagcgctattttcaaaagcactttggcatcaccagccgcacggcgtggctgcccgatacg
tttggctttaccgccgccatgccgcagatcatgcggcacgcgggcatcgacacattggtg
acaatcaaagtgtcatggaatgagaccaacagcctgccagacaatctttttcgctggcag
ggcaatgatggctcgcgagtgttggttcacactttcgacgcctatgacaatgacggctac
aatatgctgatgacacccgccgccctctgtgaagtatggggcaagcatgctgccaaggat
atgacggacacggtcattgcctcctacggctggggcgatggcggcggcgggccggacccg
gatcagatcgaaaccctgccgcttctcaatctcatgcctgccattccaaccgtcgagcat
ggagccatagagccacatattcaggctttggcaagtgatcttgaagcggcagccctgccc
atctggcgtggcgagctttatttggaataccaccgagcaacattgaccacgcaggcgcgc
accaaacaactcaaccgacaggcagaaaccgctctggtggctgcggaagctatctccgtt
cttgatgcattagagggtggaacgcctgccgcgaacactctggagccgcagtgggaattg
ctgcttcgaaaccagtttcacgacattttgccgggttcctccatccgcgaggtctatcag
caaaccgagccagagctggagggcgtcatcgatgatgcaacaacgctgatccagacccgc
ctgcaagccattgcggcacgctatagcggtgatcttgatggattgctggtggccaaccta
tccggctccccaaaaaccgcattccagattgaaagcgcacgccccgtgcccgccgccttg
caagcacaggagctgaacgggcactatgttgcggccattgagcgtgacctgaagccgctc
agtcttggctttatcagcgctgccagccagcgccgtgtaacaacggacggcaaaaccctg
gaaaatgattttgtgcggctggcgctggatgaagcgggccggatgatcagcctgatcgac
aagagatcagaccgcgagctaatggacggccccggcaatcaattgctgctgtatcgcaat
gatctgccccgcaattttgacgcctgggacattgaacccggctttgagcttggtgaagag
gaatggctgtcgcttgaaacgctggaggtgacggccaatggcccgcatctggcagaaatc
accatcaccagacgcttttcggccagcacgatccagcaaaaaatccggctgtggtccaac
agtccacgggtggaatttgtaaccgatctcgattggcacgatcggcgcacctatctgcgt
gccgccttccccgtaaccgtgctggcagaagatgcggtattcgatcaagccattggcatc
acccggaggcccacgcatgacaataccagctggcagaaagcccagttcgaatcctgcggc
catcgctttgtttcactctcggaaacagactggggtgctgccctgctctcggctgacaaa
tatggcttttctgccaagggcaaccggctgacactgagccttgttcgcggccccatgttt
cccgatatgctggccgacgagggccaccaccatttcgtttacgcccttttgccccatgat
ggccgctggtggagcgaagaggttcaggcggaggccgatctcgtcaatgcgggcctgcat
tttacgccatccaccaccactgaaaactatgatatcacacctatcggtttttccggtcaa
agtgtccgcgtgcatgccctcaagcctgcggaggatgggaaaggacatgtcttgcgcttg
tcggaatccgccggtcgtcgcggggtgtttcatttggcactgccaggcggccgcaagcca
accctaatcaatgccatcgaggtgccgcttgatgacctggatgatcccttaagccgtcct
ttcggtctcgccagcttccttttttaa
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