Agrobacterium vitis VAR03-1: RvVAR031_pl03250
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Entry
RvVAR031_pl03250 CDS
T08810
Name
(GenBank) ABC transporter ATP-binding protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf01501
beta-Lactam resistance
avf02010
ABC transporters
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_pl03250
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_pl03250
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RvVAR031_pl03250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl03250
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RvVAR031_pl03250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
BCH56994
LinkDB
All DBs
Position
pRvVAR031a:365494..366462
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AA seq
322 aa
AA seq
DB search
MTLLKITDLSVGFDTPDGQVQAVQGLNLTLNRGETLGIVGESGSGKSQASFAIMGLLARN
GRASGSVLFDGQEILNAPPSVLNPIRGARIAMVFQDPMTSLNPYMRISDQMAEVLIYQKG
MSKRDALVECTRMLDAVKIPDAKSRIRLYPHEFSGGMRQRVMIAMALLCRPDLLIADEPT
TALDVTVQAQIMGLLRDLQAEFGMAMILVTHDLGVVAGSCERVLVLYGGRMMETGPAEAL
FATPSHPYTQGLLRAIPRVDREDERLRTIPGVPPNMMNMPTGCPFAPRCDYVIADCTTAP
RPLESFAADRARACTRPVEELV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgactttgctgaaaattaccgatctttctgtggggttcgacacgccagacggtcaggtg
caggcggtacaaggcctaaacctcacgctcaaccggggcgaaacgctcggcattgtcggc
gaaagcggctctggcaaaagtcaggcctcctttgccatcatggggcttttggcgcgcaat
ggccgggcctccggctccgtgctgtttgacggtcaggaaattctcaatgcgccgccttcg
gtgctcaaccccattcgcggtgcgcgcattgcgatggtgtttcaagacccgatgacatcg
ctcaacccctatatgcgcatctccgatcagatggccgaggtgctgatctatcaaaagggt
atgtcgaaacgcgacgcgctggtggaatgcacccgcatgctggatgcggtgaaaattccc
gatgccaaatcccgcatccggctgtatccgcatgaattctctggtggtatgcgccagcgg
gtgatgattgccatggccctgctctgtcgccccgatctgctgattgccgatgagccgacc
accgcccttgatgtgacggtacaggcccagatcatggggcttttgcgcgatttgcaggcc
gaatttggcatggcgatgattttggtcacccacgatctcggcgtggtggcaggctcgtgc
gagcgggttctggtgctttacggcggcaggatgatggagacgggaccagcggaagcgctg
tttgccacgccatcgcacccctatacccaaggcttgctgcgcgccattccacgggttgac
cgcgaggatgaacggttgcgcaccattcccggcgtgccacccaatatgatgaacatgccg
accggctgtccatttgcaccccgttgcgattacgtgattgccgattgcacgacagcaccg
cgtccacttgagagtttcgcagccgatcgcgcccgcgcatgcacacgtcctgtggaggaa
ctggtatga
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