Agrobacterium vitis VAR03-1: RvVAR031_pl03550
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Entry
RvVAR031_pl03550 CDS
T08810
Name
(GenBank) ribose ABC superfamily ATP-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_pl03550
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_pl03550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl03550
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAR031_pl03550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Dodecin
Motif
Other DBs
NCBI-ProteinID:
BCH57024
LinkDB
All DBs
Position
pRvVAR031a:399037..400035
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AA seq
332 aa
AA seq
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MKYRMLAAALLLGTCLTPFATTAQDKPLKIAFLAASSQNGFNQAIYAGIEKAAKAAGNVT
TEIFDGEFSAPTQFSQVEDLTAGKRFDAIIIAPNDTVGIATALEDATAAGIKVATTLFPI
GPDLKNMQPQVKGLTTTVASDPSIGASAQAEAVVKSCEGKRPCNVVIMIGQLIYPFDNLR
YETFKTVLAKHDNIKIVATGEGNYSPDTSLKAMQDILQANPKIDAVLSNADQHLLGVEIA
LEDAGIDPSSVYLIGGGLNQITVDKIRNGTFKASLANFPVSMGSAALESVVTSLKGGTVP
VWTDESKLRDIPQIVDKAWLDAHPDFTAEWQG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaataccgaatgcttgccgccgcccttctgcttggcacctgcctcacgccgtttgcg
accaccgcccaggacaaacctttgaagatcgcctttctggcggcctctagccagaacggc
ttcaatcaggccatctatgctggcattgaaaaggcggccaaggcggcgggaaatgtcacc
accgagatattcgatggtgaattctccgccccgacgcagtttagccaggtcgaagacctg
accgccggaaagcgcttcgacgcgatcatcatcgcgccgaacgatacggtcggcatcgcc
accgcgcttgaggacgcaacggctgccggtatcaaggtcgcaaccaccctcttccccatc
ggtccagacctcaagaacatgcaaccacaggtcaagggactgacgacgacagtcgcgtcc
gacccgtcgatcggtgcctccgcacaggcagaggcagtggtaaaatcctgtgagggcaag
cgcccctgcaacgtcgtcatcatgatcggacagttgatctacccattcgacaatctgcgc
tacgagacgttcaagaccgttctcgccaagcatgacaacatcaaaatcgtggcgaccggc
gaaggtaattacagccccgacacgtctctcaaggctatgcaggatatcctgcaggccaat
ccgaagatcgacgcagtgctgtccaatgccgaccagcatctgctaggcgtcgagatcgcg
ttagaagatgccggtattgatccctcatccgtctatctcatcggcggcgggctgaaccag
atcaccgtcgacaagatccgcaacggcaccttcaaggcgtcgcttgccaacttcccggtc
tccatgggttctgcggcgcttgagtccgtcgtcacttcgctgaaaggcggcaccgtacct
gtctggactgacgaatccaagctgcgagatattccgcagattgtcgataaggcctggctc
gatgctcatcccgattttacggctgaatggcagggctga
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