Agrobacterium vitis VAR03-1: RvVAR031_pl03570
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Entry
RvVAR031_pl03570 CDS
T08810
Symbol
rbsC
Name
(GenBank) ribose ABC transporter permease
KO
K10440
ribose transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_pl03570 (rbsC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl03570 (rbsC)
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAR031_pl03570 (rbsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
WBS28
Motif
Other DBs
NCBI-ProteinID:
BCH57026
LinkDB
All DBs
Position
pRvVAR031a:401640..402614
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AA seq
324 aa
AA seq
DB search
MNKSPTAGSAKNEGRPFNAGAFAREYGVLVIIAALLIGLSLVSDSFLTVRNLLNIVNQSA
PLMIIACALTLVIIGGGFDLSTGAIFGVAAVSSGWIATQVDPYVAILAGPLIGLALGAVN
GLIITTFNVHSFLVTLATSLVYRGIAILITGGSLIPVRIEAFSWLGRGRIGMVNVAVIVV
IVFMIMMVVLLNRTTFGRKVFAVGGNEEAAILSGIRTNLVKIITFTLSGGAAGLAGVITV
SRLSMAEPQAGAGLELEAIAAVILGGTAITGGAGAIWRSIAGVLLMALIGNGFNILNVNP
FFKDLTTGVIIVIAVALAASNSRR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcaccgacagccggatctgcaaaaaatgaaggcagacctttcaacgcaggc
gcctttgcccgcgaatacggcgttctcgtcatcattgcggctttgctgatcgggctcagc
ctggtctcggacagttttctgacggtgcgcaacctgctcaatatcgtcaatcaaagcgca
ccgctgatgattatcgcctgcgcattgacactggtcatcattggcggcggattcgacctg
tcgaccggtgccatctttggcgtggccgctgtctcgtccggctggatcgcaacccaggtc
gatccctatgtcgccatccttgcgggcccattgatcgggctggctctcggcgctgtcaac
ggattgatcatcaccaccttcaacgtacattccttcctcgttaccctggcaaccagtctc
gtctatcgcggtatcgcgatcctgatcaccggtggctcgctcattcctgtgcggatcgaa
gccttttcctggctcggacgcgggcgcatcggcatggtcaatgtggcggttattgtcgtc
atcgttttcatgatcatgatggtggtgctgctcaaccgcacgaccttcggccgcaaggtc
ttcgctgtcggcggcaatgaagaggcggccatcctctccggcatcagaaccaatctggtc
aagataatcaccttcacgctcagtggcggcgctgcagggcttgccggtgtgattactgtg
tcgcgcctctccatggccgaaccgcaggcgggcgccggtcttgaactggaagcaatcgcc
gccgtcattctcggtggcacggcaatcacgggcggcgcgggcgcaatctggcgatcgatc
gccggcgtgctcctaatggcgctcatcggcaatggcttcaatattctcaacgtcaatcct
ttcttcaaggacctgacaacgggagtgatcatcgtgatcgcggtcgcgctcgccgcatcg
aattcgcggcgctga
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