Agrobacterium vitis VAR03-1: RvVAR031_pl03700
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Entry
RvVAR031_pl03700 CDS
T08810
Name
(GenBank) catechol 1,2-dioxygenase
KO
K03381
catechol 1,2-dioxygenase [EC:
1.13.11.1
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00361
Chlorocyclohexane and chlorobenzene degradation
avf00362
Benzoate degradation
avf00364
Fluorobenzoate degradation
avf00623
Toluene degradation
avf01100
Metabolic pathways
avf01120
Microbial metabolism in diverse environments
avf01220
Degradation of aromatic compounds
Module
avf_M00568
Catechol ortho-cleavage, catechol => 3-oxoadipate
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RvVAR031_pl03700
00364 Fluorobenzoate degradation
RvVAR031_pl03700
00361 Chlorocyclohexane and chlorobenzene degradation
RvVAR031_pl03700
00623 Toluene degradation
RvVAR031_pl03700
Enzymes [BR:
avf01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.1 catechol 1,2-dioxygenase
RvVAR031_pl03700
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Motif
Pfam:
Dioxygenase_C
Dioxygenase_N
CarboxypepD_reg
ThrE
MG4
Motif
Other DBs
NCBI-ProteinID:
BCH57039
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Position
pRvVAR031a:complement(414689..415582)
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AA seq
297 aa
AA seq
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MVIKTESDVTPAVIAAMEKTSDPRVREILVAMVKHLHAFVREVRLTEVEFREATAILNEI
GQMQTDSHNEFVLMSGSLGVSSLVCLLNNGDKGQTETSQSLLGPFWRLNSPRVENGGTII
RSDTPGTPLFVRAQVVDREGRPISGAEVDVWHASPVGLYENQDPDQAEMNLRGKFTTAED
GRFWFQTVKMVGYPIPVDGVVGRMLKAQGRPPYRPAHLHALIFKHGYKTLISQVFDPTDP
HIESDVQFGVTAALTGDFVRHDEPHPTDGDVRGPWFSLDYTYVMEPGDAVLPRPPIK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggtaattaaaactgaaagtgatgtaacgcccgccgtcattgctgccatggagaagact
tccgatccaagggtgcgggaaatcctcgtggctatggtaaagcaccttcatgctttcgtt
cgcgaagtgcggctgaccgaagtggaattccgggaggcaaccgccatcttgaacgagatt
ggccaaatgcaaacggacagccacaacgagttcgttctgatgtcaggctcccttggcgtg
tcgtccctcgtctgtctgctcaataatggtgacaaggggcaaaccgaaacctcccaatcg
cttcttggaccattctggcgcctgaactctccacgagtcgaaaatggcggtacaatcatt
cggtctgacacgcctggcacaccactttttgtccgggctcaagtggttgaccgcgaaggc
cgtccgatttcgggtgctgaggttgatgtctggcacgcttcgcccgtcggtctttacgaa
aaccaggatcccgatcaggctgagatgaacttgcgcggcaaattcacgaccgccgaggat
gggcgcttctggttccagacggtgaagatggtaggatatccgattcccgtcgatggcgtt
gttggacgcatgctcaaggctcagggccgccccccctaccggccagcgcatttgcacgcg
ctgatctttaaacatggctataaaacactgatctcacaggtgtttgatcccaccgatcca
catatcgagtcggatgtgcaattcggagtcaccgcagccctgacgggcgatttcgttcgc
catgacgagccgcatccgacagacggagatgttcgaggaccctggttctcgctcgactac
acgtatgtcatggaacccggcgatgctgtcttgccgcgcccgccaatcaagtaa
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