Agrobacterium vitis VAR03-1: RvVAR031_pl04200
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Entry
RvVAR031_pl04200 CDS
T08810
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_pl04200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl04200
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAR031_pl04200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
BCH57089
UniProt:
A0A6S6N048
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All DBs
Position
pRvVAR031a:456974..457645
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AA seq
223 aa
AA seq
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MALQEGVNVGLPDAAMALSALGEVSYVDKGNMTRSEIDKTIKKLIEYKKAGQFRSFWLNF
DQSVQLMASGEVVLQSMWSPAVTEVRTRGIPCTFQPLKEGHRGWYIMMFQMQHLTGLKRE
CAIEYMNWYNSGWAGAFISRQGFYNTVPENVKPQMSANEYGYWYEGKPASEPILNPFGKV
MEKPGAVRDGGSLWDRMGNIGIWNTLMDEDRYLVRRWQDFIAA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctccaggaaggtgtcaatgtcggcctgccggatgcagccatggcgctatcggcg
ctgggcgaggtctcctatgttgacaagggcaatatgacccgcagcgaaatcgacaaaacc
atcaaaaaactgatcgaatacaaaaaagccgggcaattccggtccttctggctgaatttc
gatcaatccgtgcaactgatggcctccggcgaagtggtactgcaatccatgtggtcgcct
gctgtgacagaagtacgcacgcgcggtattccctgtacattccaaccgctgaaagagggt
catcgcggctggtacatcatgatgttccagatgcagcacctgaccgggctgaagcgcgag
tgcgccattgaatacatgaactggtacaattccggctgggccggtgccttcatttcccgt
caaggcttttacaacaccgtgcctgaaaatgtgaagccgcagatgagcgcaaatgaatat
ggctattggtatgagggcaagcccgcatccgagcctattctcaacccttttggcaaggtg
atggaaaagccaggtgccgtgcgtgacggtggctcgctctgggatcgcatgggcaatatc
ggcatctggaatacgctgatggatgaggatcgctatctggtgcgccgctggcaggatttc
atcgccgcgtaa
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