Agrobacterium vitis VAR03-1: RvVAR031_pl04240
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Entry
RvVAR031_pl04240 CDS
T08810
Symbol
acoR
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_pl04240 (acoR)
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
Other families
RvVAR031_pl04240 (acoR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
RWP-RK
HTH_50
PAS_4
HTH_1
Mg_chelatase
AAA
HTH_IclR
Torsin
HTH_28
HTH_24
HTH_23
HTH_AsnC-type
TsaE
AAA_2
Motif
Other DBs
NCBI-ProteinID:
BCH57093
LinkDB
All DBs
Position
pRvVAR031a:460833..462719
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AA seq
628 aa
AA seq
DB search
MGFADHVKEIERVGQGSNTGRDAIVVESWRRCLETYQLDPAQAREAVIVSQTRLREHRQQ
AEDLVHIARSGLERLYRQVAEQNYVLLLSDRQGVTVEFLGDPSFNNNLRKAGLYLGSEWS
EPRAGTCAVGACLATGEALTIHQTDHFDITHTPLSCTAAPIYDTQGTLAAVLDISLLSSP
ILKTSQNMARHLVSSTVRRIELANLMANSRHDLVLRFAGAPEFLDVDPEAAISVDGSGRI
TGMTHGGARLLAASRGIDWRRPELVLGQPVADFFEAGLDELASLTRASLPQDRRIGVRDG
SVLFAHAIEPQQRVAGAPLVRALRPPPAMSLLGGSVEIMDNLRRKIAKLAPSALPILLQG
ETGTGKEYLARIIHEVSGLSGRFVAVNCAAIPEQLIESELFGYAPGAFTGALAKGRKGLV
EEAVGGTLFLDEIGDMPYAAQSRLLRVLAEGEVLPVGGSVAHKVEFRVVSASHRSLADMV
ATGAFRQDLYYRLNAAVLSLPRLCERGDLSWLLDKLLEKHAPADRSLRLSDTARLLILNH
RWPGNIRELDNAIAFAAALCDDGLIEVTDLPEHLAGSVQLPGDDSPEAELRAVLAACHGN
ISEAARRLGIDRTTMHRRMRRFGIDRPH
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgccgatcacgtcaaggaaattgagcgcgtcgggcagggaagcaatacgggc
cgcgacgctattgtcgtggaatcctggcggcgatgcctggagacctatcagctcgatccg
gcgcaagcgcgtgaggcggtcatcgtctctcaaacacgcctacgcgaacatcgccagcag
gcggaggacctcgtacacatcgcacgctcggggcttgagcggctctaccggcaggttgcc
gagcagaattatgttcttctcctttccgatcggcagggcgtgaccgtcgaatttctcggc
gatccctccttcaacaacaacctgcgaaaggccgggctctatctcggctcggaatggtct
gagcctcgcgctggcacgtgcgccgttggcgcctgcctggccaccggcgaggctctgacg
atccatcagaccgaccatttcgacatcacccatacaccactctcctgcaccgccgcaccg
atctatgacacgcaaggcacattggcagcggtcctcgatatttcgctcctgagttcaccc
atcttgaagacgagccagaacatggcgcgtcatcttgtctcctcgaccgtgcggcgcatc
gagctcgccaatctcatggcgaacagtcgacacgacctggtgctgcgctttgctggcgcg
ccggaatttctcgatgttgatccggaagcggcgatttccgtcgatggctccggccgcatt
actggcatgacacatggtggcgcgcggcttctcgctgcctcgcgtggaattgattggcga
cggcccgagcttgtgcttggccagccagtcgcggattttttcgaggctggcttggacgag
ctcgcttcgctgacacgcgccagcttgccacaagaccggcggattggcgtgcgcgatggg
tcggtcctgtttgcccatgcgatcgagccgcaacagcgcgtggccggggcgccgctcgtt
cgagctcttcggccgccgccagccatgagcctgctcggcggcagtgtcgaaatcatggat
aaccttcgccgcaagatcgccaagctcgcaccgagcgcactaccgatcctgcttcagggc
gagaccggaaccggcaaggaatatctggcacgcatcatccacgaggtgagcgggttgtca
ggccgcttcgttgccgtcaattgtgcagcaatccctgaacagctgatcgaaagcgaattg
ttcggctatgcgccaggcgccttcaccggcgcccttgccaagggacgaaaggggttggtc
gaggaagcggtgggcggaaccctgttcctcgacgaaatcggcgacatgccatacgccgcg
caaagcaggttgctcagggttctggccgagggtgaggtactgccggtcggcggttcggtg
gcgcacaaggtggagtttcgcgtcgtatctgcgtcgcatcggtctttggccgacatggtc
gcaaccggcgcattcaggcaagacctctactacaggctgaatgcggccgtactatccctt
ccacggctttgcgagcgcggcgatctgtcgtggctgctcgacaagttgctcgaaaaacat
gctccggccgaccgatcgctcaggctttcagacactgcccgccttttgatcctcaatcat
cgctggccaggcaatatccgcgagctggacaatgcgatcgccttcgccgcagcgctgtgc
gacgatgggctgattgaggtaacggaccttccagaacacttggctggcagtgtgcagctg
cctggcgacgacagccctgaagccgaacttcgcgctgtgctcgctgcctgccatggcaat
atttccgaggcagcgcgccgcctcggcattgatcgtaccaccatgcatcgccgtatgcgc
aggtttggcatagacaggccgcattga
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