Agrobacterium vitis VAR03-1: RvVAR031_pl04430
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Entry
RvVAR031_pl04430 CDS
T08810
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_pl04430
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RvVAR031_pl04430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
DUF3853
HTH_3
HTH_31
HTH_IclR
HTH_Tnp_ISL3
HTH_26
Motif
Other DBs
NCBI-ProteinID:
BCH57112
LinkDB
All DBs
Position
pRvVAR031a:479625..480689
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AA seq
354 aa
AA seq
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MNFVKRFTKPLYRVDMVKERVTGLKDVAAAAGVSVTTVSRMLNGSLDLPGETRKRIEDAI
VALKYQPNPHARRLSRGRSDTIGLVVPDIANPFFATLVAAVEEEADLRGLALSLYATLNR
PGREMAYLSLLERNHVDGLIFITNHPDQGELAAIINRTGKVVVVDEDVPDATVPKLFCDN
QQGGELAGQHLAGFGHRHVLYIGGPDVMISTERRFIGFEAAMRAKHGENAVIERYCGDYT
AEFGRQAARRFLEGAREATAIFASSDEIAIGVIEVLRAEGISIPEQISVIGFDDVGPLHL
FAPPLTAIRQPVRGMGSRALSLLLDTDWQQPPKASEELLPVEIVVRNSVAPPAK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgaactttgtaaagcgttttactaaaccgctttacagggtggatatggtcaaggaacgg
gtcactgggttaaaggatgttgccgccgccgctggcgtgtcggtgaccaccgtgtcgcgc
atgctgaatggctcgcttgatcttcctggcgagacgcgcaagcggattgaagacgccatt
gtcgcgctcaaatatcagccaaatccgcatgcaaggcgtctcagccgtggccgctcggac
accatcggtcttgtggtgccggatattgccaatccgttctttgcaactctggtggctgcc
gtcgaagaggaagcggatctgcgcggtttggcgctgtcgctctacgccacgctaaaccgc
ccgggtcgcgaaatggcatacttaagcctgctggagcgcaaccatgtggatggcctgatc
tttatcaccaatcaccctgaccagggtgagttggcggcgatcatcaaccgcaccggaaaa
gtggttgtggtcgatgaagacgtgccggatgcgacggtgccaaagctgttttgtgacaac
cagcaaggcggagaactggccgggcagcatctggccggttttggccatcggcatgttctc
tatattggcgggccggatgtgatgatcagcaccgagcgccgctttatcgggtttgaagcc
gccatgcgcgccaagcacggtgagaatgcggtcatcgagcgctattgcggtgattatacc
gccgagtttggcagacaggcagcgcggcgttttctggagggcgcacgcgaggcgacggca
attttcgccagctccgacgaaatcgctatcggtgtcattgaagtgctcagagcggaaggg
atctccattcctgagcagatttccgtcatcggcttcgatgatgttggacctttgcatctt
tttgccccgccgttgacggccatccgtcagccggtgcggggaatgggaagtcgcgctctt
tcgctgcttcttgatacggattggcaacagcctccgaaagcatcggaggaattgctgcca
gtggaaatcgtcgtgcggaactccgttgcaccgccagcgaaataa
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