KEGG   Agrobacterium vitis VAR03-1: RvVAR031_pl04440
Entry
RvVAR031_pl04440  CDS       T08810                                 
Name
(GenBank) ABC transporter permease
  KO
K10439  ribose transport system substrate-binding protein
Organism
avf  Agrobacterium vitis VAR03-1
Pathway
avf02010  ABC transporters
avf02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:avf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    RvVAR031_pl04440
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    RvVAR031_pl04440
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:avf02000]
    RvVAR031_pl04440
Transporters [BR:avf02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   Ribose transporter
    RvVAR031_pl04440
SSDB
Motif
Pfam: Peripla_BP_4 Peripla_BP_1 Peripla_BP_3 Ntox4 PucR
Other DBs
NCBI-ProteinID: BCH57113
LinkDB
Position
pRvVAR031a:480729..481685
AA seq 318 aa
MTRTFTRRTINAALAVTALTGLCLTAGIANAAQKTFALVQINQQALFFNQINQGAQKAAD
AAGAKLVIFNANNDPAAQNSAIETYIQQKVDGIAVVAIDVNGIMPAVKQAADAGIPVVAI
DSILPAGPQKAQIGVDNAKAGADIGKFFVDYVKKDMGGKAKLGVVGALNSFIQNIRQKGF
EDTIKGVSGITSAGVVDGQNVQDNALAAAENLITGNPDMTAIYATGEPALLGAVAAVQSQ
GKQDSIKVFGWDLTAQAIAGIDAGYVAAVIQQDPAAMGEAAVKALKTIADGGAVEKTIAV
PVTIVTKANVEPYRAVFK
NT seq 957 nt   +upstreamnt  +downstreamnt
atgacccggactttcacacgtagaaccatcaatgcagccttggctgtcacagccctcacc
ggcctgtgcctgaccgcaggaattgccaatgccgcgcaaaaaacctttgcgctggtgcag
atcaatcaacaggcactgtttttcaaccagattaatcagggtgcccagaaggccgcagat
gccgcaggcgcaaaactggtgattttcaacgccaacaatgaccctgctgctcaaaacagc
gccatcgagacctatattcagcagaaggtagacggtattgccgttgtggccattgacgtc
aacggcatcatgccagcggtcaaacaagcagccgacgccggcattccggtggtcgccatc
gacagcattctgcctgctggcccccagaaagcacagattggcgtcgataacgccaaagcg
ggtgccgatatcggcaagttcttcgtcgattatgtcaagaaggacatgggcggcaaggct
aagcttggtgttgtcggtgcgctgaactccttcatccagaatatccgccagaagggcttt
gaagacaccatcaagggcgtctccggcatcacctcggcaggtgtggttgatggccagaac
gtccaggacaatgcgctggcagcggctgaaaacctgatcaccggcaaccctgatatgacc
gcaatatatgccacgggcgagcccgcgttgttgggtgccgttgccgccgtgcaaagccag
ggcaagcaggacagtatcaaagtgtttggctgggatctgaccgctcaggccattgccgga
attgacgctggttatgttgccgcggtgatccagcaggacccggcagccatgggtgaagcg
gctgtgaaagcgctgaagaccattgcagacggtggcgcggttgaaaaaaccattgccgtg
cctgtcaccatcgtcaccaaggccaatgttgagccttaccgggccgtgttcaaatga

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