Agrobacterium vitis VAR03-1: RvVAR031_pl04440
Help
Entry
RvVAR031_pl04440 CDS
T08810
Name
(GenBank) ABC transporter permease
KO
K10439
ribose transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_pl04440
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_pl04440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl04440
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAR031_pl04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Ntox4
PucR
Motif
Other DBs
NCBI-ProteinID:
BCH57113
LinkDB
All DBs
Position
pRvVAR031a:480729..481685
Genome browser
AA seq
318 aa
AA seq
DB search
MTRTFTRRTINAALAVTALTGLCLTAGIANAAQKTFALVQINQQALFFNQINQGAQKAAD
AAGAKLVIFNANNDPAAQNSAIETYIQQKVDGIAVVAIDVNGIMPAVKQAADAGIPVVAI
DSILPAGPQKAQIGVDNAKAGADIGKFFVDYVKKDMGGKAKLGVVGALNSFIQNIRQKGF
EDTIKGVSGITSAGVVDGQNVQDNALAAAENLITGNPDMTAIYATGEPALLGAVAAVQSQ
GKQDSIKVFGWDLTAQAIAGIDAGYVAAVIQQDPAAMGEAAVKALKTIADGGAVEKTIAV
PVTIVTKANVEPYRAVFK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacccggactttcacacgtagaaccatcaatgcagccttggctgtcacagccctcacc
ggcctgtgcctgaccgcaggaattgccaatgccgcgcaaaaaacctttgcgctggtgcag
atcaatcaacaggcactgtttttcaaccagattaatcagggtgcccagaaggccgcagat
gccgcaggcgcaaaactggtgattttcaacgccaacaatgaccctgctgctcaaaacagc
gccatcgagacctatattcagcagaaggtagacggtattgccgttgtggccattgacgtc
aacggcatcatgccagcggtcaaacaagcagccgacgccggcattccggtggtcgccatc
gacagcattctgcctgctggcccccagaaagcacagattggcgtcgataacgccaaagcg
ggtgccgatatcggcaagttcttcgtcgattatgtcaagaaggacatgggcggcaaggct
aagcttggtgttgtcggtgcgctgaactccttcatccagaatatccgccagaagggcttt
gaagacaccatcaagggcgtctccggcatcacctcggcaggtgtggttgatggccagaac
gtccaggacaatgcgctggcagcggctgaaaacctgatcaccggcaaccctgatatgacc
gcaatatatgccacgggcgagcccgcgttgttgggtgccgttgccgccgtgcaaagccag
ggcaagcaggacagtatcaaagtgtttggctgggatctgaccgctcaggccattgccgga
attgacgctggttatgttgccgcggtgatccagcaggacccggcagccatgggtgaagcg
gctgtgaaagcgctgaagaccattgcagacggtggcgcggttgaaaaaaccattgccgtg
cctgtcaccatcgtcaccaaggccaatgttgagccttaccgggccgtgttcaaatga
DBGET
integrated database retrieval system