Agrobacterium vitis VAR03-1: RvVAR031_pl04640
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Entry
RvVAR031_pl04640 CDS
T08810
Name
(GenBank) AsnC family transcriptional regulator
KO
K26601
Lrp/AsnC family transcriptional regulator, repressor for azl operon
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_pl04640
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RvVAR031_pl04640
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR
HTH_20
HTH_Crp_2
NirdL-like_HTH
DUF7343
HTH_IclR
HTH_47
HTH_5
PheRS_DBD1
HTH_53
HTH_CodY
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BCH57133
LinkDB
All DBs
Position
pRvVAR031a:503215..503685
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AA seq
156 aa
AA seq
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MSFTFDEIDRRILKVLQRDGRISNIDLAKEVGLSPSPCLRRVRLLEEAGIIDRYVAVLDP
TKVGAGLTVFARVWFKTQDAQVTLQFAEAVRRLPEVMECYLTTGECDAILRIVTADLHSY
WRFQADHLTRIASVLNVKTDVPMETLKRSFELPLAL
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
gtgtcattcacttttgacgagattgatcggcggatccttaaggtacttcaacgcgatgga
cgcatttccaatatcgacctggcgaaagaggttgggctgtctccttcgccgtgtctgcgc
cgcgttcggcttttggaagaggcgggtatcattgatcgctacgtggccgttcttgatccg
accaaagtgggtgcaggcctgacggtgtttgcccgcgtctggttcaaaacgcaggatgca
caagtcaccctccaatttgcagaagctgtcaggcgcctaccggaagtcatggaatgctac
ctgaccaccggagaatgcgacgccattctgcgcatcgtcaccgccgacctccatagctat
tggcgtttccaagcggatcatctgactcgtatcgcgagcgtgctgaacgtaaaaacggat
gttccgatggaaaccctcaagcgaagtttcgaattaccattggcactgtaa
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