Agrobacterium vitis VAR03-1: RvVAR031_pl05140
Help
Entry
RvVAR031_pl05140 CDS
T08810
Name
(GenBank) ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf01501
beta-Lactam resistance
avf02010
ABC transporters
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_pl05140
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_pl05140
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RvVAR031_pl05140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_pl05140
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RvVAR031_pl05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
ATP-synt_ab
VIT
AIG1
Motif
Other DBs
NCBI-ProteinID:
BCH57183
LinkDB
All DBs
Position
pRvVAR031a:complement(605653..606630)
Genome browser
AA seq
325 aa
AA seq
DB search
MPDDPLLVVENLRKYFPIRQGFTREKIGDIKAVDDVSFSIHKGQTFGLVGESGCGKTTTG
KSVLGINNPVEGKILYKGRDLARLSEREFRPYRRELQLIFQDPYGSLDPRQSAASILEEA
IQSGGEGLGGEGLRARVHDLLDIVELGNAMGRRYPHEMSGGQRQRLGIARALACKPELIV
CDEPVSALDVSIQAQIINLFKSIQKELGITYLFVAHDLAVVRHISHHIGVMYLGRLVEVT
DAEKLYSDARHPYTKALLSAIPITDYYAEQKRERIVLRGEVPSPMNKPSGCPFHPRCAQA
TAECKEIVPELRSVGQNHTAACHHV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgatccgctgcttgtggtggaaaaccttcgaaaatattttccaatccgccaa
ggctttacccgtgaaaaaatcggtgacatcaaggcggttgatgatgtgtcgttcagcatc
cataaagggcaaacctttggtcttgttggcgaaagtggctgcggcaagaccaccacgggc
aaaagcgtgctgggcatcaacaatccggtcgaaggcaagatcctgtataaaggacgggat
ctcgcgcggttgagcgagcgtgaattccgaccttatcgccgtgaattgcaactcattttc
caagacccttatggctcactcgaccctcggcaatcggcagcatccattcttgaagaagcc
attcaatccggtggagagggccttgggggagaaggattgcgcgcaagagtccatgacctt
ctggacatcgttgaactcgggaacgccatgggacggcgctatccacatgaaatgagcggc
gggcaaaggcaacgtcttggcatagcccgcgcactggcctgcaagccggaactgattgtc
tgcgacgagccggtttcggcacttgatgtgtccattcaggcgcagattatcaatctgttc
aaatcgatccagaaagagcttggcataacctacctgtttgtcgcccatgatctggcggtg
gtcaggcatatcagccaccatatcggcgtcatgtatttgggacgtctggtggaagtgacg
gatgccgagaaactctattcggatgctcgccatccctataccaaggcgttgttatcggcc
attccgattaccgattactatgccgagcaaaagcgtgaacggatcgtgcttcgcggtgaa
gtgccaagccctatgaacaagccctccggctgtccgtttcatcctcggtgcgcgcaggcg
acagccgaatgcaaggaaatcgtccccgagttacgcagcgttggccaaaaccacacagca
gcttgccatcatgtctag
DBGET
integrated database retrieval system
