Agrobacterium vitis VAR03-1: RvVAR031_pl05340
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Entry
RvVAR031_pl05340 CDS
T08810
Name
(GenBank) plasmid partitioning protein RepB
KO
K03497
ParB family transcriptional regulator, chromosome partitioning protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_pl05340
03036 Chromosome and associated proteins [BR:
avf03036
]
RvVAR031_pl05340
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
avf04812
]
RvVAR031_pl05340
Transcription factors [BR:
avf03000
]
Prokaryotic type
Other transcription factors
Others
RvVAR031_pl05340
Chromosome and associated proteins [BR:
avf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RvVAR031_pl05340
Cytoskeleton proteins [BR:
avf04812
]
Prokaryotic cytoskeleton proteins
MinD / ParA class of bacterial cytoskeletal proteins
RvVAR031_pl05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ParBc
RepB
Motif
Other DBs
NCBI-ProteinID:
BCH57203
LinkDB
All DBs
Position
pRvVAR031a:complement(630076..631098)
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AA seq
340 aa
AA seq
DB search
MSRKHILGVSTDAQDAKPSDNRAGKTRSMPLLGVARKERDPATKLTANIGNALREQNDRL
SRAEEIERRLAEGQAVIELDASTVEPSFVQDRMPGDIDGLLESIREQGQQVPILVRPHPD
MPGRYQVGFGHRRLQAVSELGLPVKAVVRELTDEQLVIAQGQENNERQDLTFIEKARFAH
RLNKQFAREIVIAAMSIDKSNLSKMLLLVDTLPPELIDAIGPAPGVGRPSWQQLSELVEK
APSPSEVVKYALSSAVQALPSADRFKAVLASLKPPRLSRGLPEIMSTPDGDRLAQISQSK
SKLEITIDRKATPDFAAFVIDHLPALFQAHRAQNQKKQGE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagccggaagcatatccttggtgtctcgacggatgcccaagacgcgaagccttctgat
aaccgggcaggtaaaacgcgatcaatgccgcttctcggggtagccaggaaagaacgcgat
ccggcaacaaagctgactgcgaatattggaaacgcactgcgagagcaaaatgatcgtttg
agccgcgccgaagagatagagcggcgtctcgctgaagggcaagcggttatcgaattggat
gcctcgaccgtcgagccatccttcgtgcaagaccggatgcctggcgatatcgacggactt
ctcgagtcgattcgggaacaaggccagcaggtcccaattctcgtgcgccctcacccggat
atgccgggccgatatcaggtcggcttcggtcatcgacggcttcaggccgtttcagaatta
ggtcttccggtcaaagcggttgttcgcgagctgacggacgaacaattggtcattgcacag
ggccaggagaataacgagcgccaggatctcacctttatcgagaaagcgcgttttgcacat
cgcttgaataagcaattcgcgcgcgagatcgttatcgccgcgatgtcgatcgacaaaagt
aacctgtcgaagatgcttctgcttgtcgacaccctccccccggagttgatcgatgcaatc
ggccccgcacctggggtcggccgaccaagctggcagcaactgtcagagcttgttgaaaag
gccccctccccttcagaggtcgtaaaatacgccctatcgagtgcggttcaagctttgcca
tccgcagatcggttcaaggcggtgttggccagccttaagcctccacggctctctcggggg
cttccggaaattatgtcgacccctgatggggatagattggctcagatttcgcaaagcaaa
tccaagttggaaatcacgatagacaggaaggcgacgcctgattttgcggccttcgtcatt
gatcacttgcctgcgctttttcaggcgcaccgagcacagaaccagaagaaacaaggagag
tag
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