Agrobacterium vitis VAR03-1: RvVAR031_pl06340
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Entry
RvVAR031_pl06340 CDS
T08810
Symbol
hmrR2
Name
(GenBank) heavy metal-dependent transcription regulator 2
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_pl06340 (hmrR2)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
avf01504
]
RvVAR031_pl06340 (hmrR2)
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RvVAR031_pl06340 (hmrR2)
Antimicrobial resistance genes [BR:
avf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
RvVAR031_pl06340 (hmrR2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
DUF3723
Motif
Other DBs
NCBI-ProteinID:
BCH57303
LinkDB
All DBs
Position
pRvVAR031b:87019..87462
Genome browser
AA seq
147 aa
AA seq
DB search
MNIGQASKASGVSTKMIRYYEQIKLISPAHRTEASYRTYSDNDIHTLRFVRGARDLGFSV
EQMKTLLTLWRDRSRASADVKAIALEHIAELERKAAAIQAMTKTLKHLANNCQGNGRPDC
PIIEEIANASEKDTPEINARFGVGAMK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgggcaagcctcaaaagcgagcggcgtttccacaaaaatgatccgctactac
gagcagataaagttgataagccctgcgcaccggacggaggcgagttatcgcacttacagc
gacaacgacattcatacattgcggtttgtccgaggagcccgggacctcggtttttcggtg
gagcagatgaaaacgcttttgaccctatggcgtgaccggtcgagagcgagtgcagacgtc
aaagcgattgctcttgagcatatcgccgaactggagcgcaaggcggcagcaatacaagcc
atgaccaagaccctgaagcacctggcgaacaattgccaaggcaatggccgaccggattgc
ccgatcattgaagagatagcgaacgcctccgaaaaggatacaccggagatcaatgcccgg
tttggggttggcgctatgaaatga
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