KEGG   Anaerococcus vaginalis: I6H45_00520
Entry
I6H45_00520       CDS       T07162                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
avg  Anaerococcus vaginalis
Brite
KEGG Orthology (KO) [BR:avg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:avg02048]
    I6H45_00520
Enzymes [BR:avg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     I6H45_00520
Prokaryotic defense system [BR:avg02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    I6H45_00520
SSDB
Motif
Pfam: DEAD Cas3-like_C_2 ResIII Helicase_C PhoH AAA_22 nSTAND_NTPase5 Cas3_HD DUF961
Other DBs
NCBI-ProteinID: QQB62016
UniProt: A0A7T4F1F0
LinkDB
Position
102882..105404
AA seq 840 aa
MKLDFIVKNPDKYLGHIEGVGNNKEKLEDHINKTFAYYQKILDEKNLGKVFERFFLSIFD
EKDEYTYFKDLIDSVILFHDLGKINSRFQRNKLKNFEIDLIDLGIESQHSILSSFIYVYI
FVGKIKNLKIDDELKEKFYYLIFLNAFVISRHHSDLSDFSYSIHNFFDLFIDERSKFYKT
LNYLSKDKNIKEEFFDDFEEISNDIMDLVYDFDMDSSYTDFKKSKSKEIYIYTRLIYSIL
VASDFYATTDYMNGYKTKLPKIDQNDLIKIYNNSKLIKSIRKSEKDKSYEKKENINDLRT
KIFLNAEKNLEEERDKNIFFLEAPTGSGKSNTAMNLSFKLLNNQINKIIYAYPFNTLVEQ
NKNTLLKYYKKTSIEEKISIINSITPIGKSDNEDFMKDWDYYIKSLLDRQFLHSPFIITS
NVGLFNTLFSNKRKNIFGLYQLTNSVIVLDEIQAYREDLWNEIIEMLEIYSKIFNLKIII
MSATLPDLSALLDEDKKKNIGKLIKNPREMFNEPLFKNRVKINYDLLDLGKIDYDHLLNH
MKENIGNHKKILVEFIRKKDAENFFKILNEEEFFAQYNILILTGDDNLRRKAQVIGQISG
EVIKKTILIASQVVEAGVDIDMDIGYKDISMLENEEQFLGRIGRSALKNDAVAYFFDMAD
EKKIYKNAQDILTLRNKDRRKNLETKDFSRYFALKLQKAKNDRDEYAYINFEKDLIKLNF
EKISKHMELIDDNRQMIELFLNRNLRINGKEINGSEIWTQYANLIENKDMDYSEKMVKLS
ENKAQMSDFLYRITKRDFIKYIGKANDIIGNLVYIEDGEKYIYNERLNYKNENDEFEDIL
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgaaacttgattttatagttaaaaatccagataaatacctaggtcacatagaaggagta
ggaaataataaagaaaaattagaagatcatattaataaaacttttgcatattaccaaaag
attctagatgaaaaaaacttgggaaaagtctttgaaagatttttcctaagtatttttgat
gaaaaagatgaatatacttattttaaagatttgatagattcagtaattttgtttcatgat
ttaggaaagataaattctaggtttcaaagaaataaattaaaaaattttgaaatagacctt
atagatttgggaatagaaagccaacattctatactttcttcatttatttatgtttatatt
tttgttggaaaaattaaaaacttaaaaattgatgatgaactaaaagaaaaattttattat
cttatttttttaaatgcctttgtaatttctagacatcatagtgatttatcagacttctca
tattcaattcataatttttttgatttatttattgatgaaagaagtaaattttataaaact
ttaaattatttaagtaaagataagaatataaaggaagaattttttgatgattttgaagaa
atttcaaatgatattatggatcttgtttatgattttgatatggattcttcttatacggat
ttcaaaaaatcaaagtccaaagagatttacatatatacaagacttatttattctatttta
gttgcatctgacttttatgctacaactgattatatgaatggatataagacaaagcttcca
aaaattgaccaaaatgaccttataaagatatacaataattcaaaacttataaaaagtatt
agaaaaagcgaaaaagacaagtcttatgagaaaaaagaaaatataaacgatcttaggaca
aaaatttttctaaatgcagaaaaaaatttagaagaagaaagggataagaatatatttttc
ctagaagctcctacaggttctggcaaatctaatactgctatgaatttatctttcaaatta
ttaaataatcagattaataaaataatatacgcctatccctttaacaccttggtagaacag
aataaaaatactcttttaaaatactataaaaaaaccagcatagaagaaaaaatttcaatt
ataaattccataacacctattggaaaaagtgacaatgaagattttatgaaagattgggat
tattatataaaatctttattggataggcaatttctccactctccgtttataatcacatct
aatgtagggctttttaatacgcttttttcaaataaaagaaaaaatatcttcggcctttat
caacttacaaattctgtcattgttttggatgaaattcaagcctacagggaggatttgtgg
aatgaaattatagaaatgttggagatttattccaagatttttaatttaaaaataattata
atgtcggcaactcttccagatttatcagccttattagatgaggataaaaagaaaaatata
ggaaaattaattaaaaatccaagagagatgtttaatgagcctttatttaaaaatagggtt
aaaataaattatgatttgttagatttgggaaagattgactatgatcatcttttaaatcat
atgaaagaaaatataggaaatcacaaaaaaatattggtagaatttattagaaaaaaagat
gcggaaaatttctttaaaattttaaatgaggaggaatttttcgctcaatacaatattttg
attttaacgggagatgataatttgagaaggaaggctcaagttatcggacaaataagtgga
gaagttattaaaaaaaccatattaattgcaagtcaggttgtagaagctggagttgatatt
gacatggatattggttacaaagatatatctatgcttgaaaatgaagaacaatttttggga
agaattggaagatcggctttaaaaaatgatgctgtagcatatttttttgatatggcagat
gaaaagaaaatttataaaaatgcccaagatattttgactctaagaaataaagataggaga
aaaaatcttgaaacaaaagatttttctagatattttgccttaaaattacaaaaagcaaaa
aatgatagggatgaatatgcctatataaattttgaaaaagaccttattaaattaaatttc
gaaaaaatatcaaaacacatggaattaattgatgataataggcaaatgatagaattattt
ttaaatagaaatttaaggataaatggaaaagaaataaatggatctgaaatttggactcaa
tacgcaaatcttattgagaataaagatatggattatagtgaaaagatggtaaaactttca
gaaaataaagcacaaatgtcagattttctttatagaattacaaaaagagattttataaaa
tatattggaaaagcaaatgatataataggaaatcttgtttatatagaagatggagaaaaa
tatatttacaatgaaagattaaactataaaaatgaaaatgatgaatttgaggacatacta
tga

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