Anaerococcus vaginalis: I6H45_02320
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Entry
I6H45_02320 CDS
T07162
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
avg
Anaerococcus vaginalis
Pathway
avg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6H45_02320 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avg03019
]
I6H45_02320 (recQ)
03400 DNA repair and recombination proteins [BR:
avg03400
]
I6H45_02320 (recQ)
Enzymes [BR:
avg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6H45_02320 (recQ)
Messenger RNA biogenesis [BR:
avg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6H45_02320 (recQ)
DNA repair and recombination proteins [BR:
avg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6H45_02320 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Cas3-like_C_2
Sod_Ni
Motif
Other DBs
NCBI-ProteinID:
QQB62330
UniProt:
A0A7T4F1N2
LinkDB
All DBs
Position
449250..451037
Genome browser
AA seq
595 aa
AA seq
DB search
MNILKSLKKYFGFDSFRKGQDELVENILKGNDVLGVLPTGGGKSICYQLPALMLDGICLV
ISPLISLMKDQVDSLKENGIKAEFINSSQDIKTYTQTLRKIKRNEIKILYISPERLENEF
FIDFIEDLNISFIAVDEAHCISQWGHDFRPSYKLIPQIYDLFDKKIQIAAFTATATKSVR
EDIINNLKLSNPFVKVTGFDRENLLFEVRKPKDKLAFLSNYLSDKKDLSGIIYASTRKRV
ETCYKYLKKLSYNVTLYHAGLSDKEKKKNQEDFIYDRKNIIVATNAFGMGIDKSDVRYVI
HMNMPKDMESYYQEAGRAGRDGEKSDAILLYSTQDIVINKYLISQSPNRAYQLVKLQKLQ
TIINYVNTNKCLRAFILEYFGQDAKEKCNNCSNCLDDYEKIDVSLDSQKILSCIYRLGQR
YGISTIVDCLKGSNNKNSKEKNLKNISTFALMKEKNTKYIKDLIGVLIADGYIKVSGFKY
PILKLNEKSKEVLFSKKKVYIRDLKEENKKEKIDKFNGNFDYDIDLFNNLKKLRLEISKK
RNIPPFIVFSDASLIDMARLKPKNERDFLKIKGVGEKKLSQYGDLFIGKIIEFDN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttaaaaagtttaaaaaaatattttggttttgattcttttagaaaagggcaa
gatgaattagttgaaaatatattaaaaggaaatgatgtcttgggagttttgccgacaggc
ggtggcaaatcaatctgctatcaacttccagctctaatgcttgatggaatttgccttgtg
atttctcctttaatttctttaatgaaagatcaagttgattctttaaaagaaaatggaatt
aaggcagaatttataaattcaagccaagatattaaaacttatacacaaactttaagaaaa
ataaaaagaaatgaaataaaaattttatatatttccccagaaagattagaaaatgaattt
ttcatcgattttattgaagatttaaatatttcttttatagcagttgatgaggcacattgt
atttctcagtggggacatgattttagaccatcatataaattaattccccaaatttatgat
ttgtttgataaaaaaatacaaatagcagccttcactgcaacagctacaaaatcagttaga
gaagatataataaataatttaaaattatctaatccttttgtaaaagttacaggatttgat
agggaaaatcttttgtttgaagtaagaaagccaaaagataaattggcatttctttcgaat
tatttatcagataaaaaagatttatcgggaattatttatgcctcaactagaaaaagagtg
gaaacttgctataaatatttgaaaaaattatcctataatgtaactttgtaccatgcagga
ctaagcgataaggaaaaaaagaaaaatcaagaagattttatttatgatagaaaaaatata
attgttgcaacaaatgcttttggaatgggaattgataaatctgatgtaagatatgtaatt
cacatgaatatgccaaaggatatggaatcttattaccaagaagcgggcagggcaggaaga
gatggcgaaaaatctgatgcaattttactttattcaactcaagatatagttataaataaa
tatttaatttcccaatctccaaacagagcatatcaattggtaaaattacaaaaacttcaa
acaataataaattatgtaaatacaaataagtgtttgagggcatttattttggaatatttt
ggtcaagatgcaaaagaaaaatgtaataattgttcgaattgcctagatgattatgaaaaa
attgacgtaagccttgatagtcaaaaaattttatcttgtatttatagattaggacaaaga
tatgggatttctacaatcgtcgattgtttgaaaggttcaaataacaaaaattccaaagaa
aaaaatttaaaaaatatatcaacttttgctttgatgaaagaaaaaaatacaaaatatata
aaagatctgataggagttttgattgcagatggttatataaaagtttctggttttaaatat
ccaatcttaaaattaaatgaaaaatcaaaagaagttttattttctaaaaagaaagtttat
attagggatttgaaagaagaaaataaaaaagaaaaaattgataaatttaatggaaatttt
gattatgatatagatttatttaataatttgaaaaaattaaggctagaaatttctaaaaaa
agaaatattccgccttttatagttttctctgacgcatctttaatagatatggcaagatta
aaaccaaaaaatgaaagagattttttgaaaataaaaggagtaggcgaaaaaaaattaagc
caatatggggacttgtttattggaaaaattatagaatttgacaattaa
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