Anaerococcus vaginalis: I6H45_06505
Help
Entry
I6H45_06505 CDS
T07162
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
avg
Anaerococcus vaginalis
Brite
KEGG Orthology (KO) [BR:
avg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avg03032
]
I6H45_06505 (topA)
03400 DNA repair and recombination proteins [BR:
avg03400
]
I6H45_06505 (topA)
Enzymes [BR:
avg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I6H45_06505 (topA)
DNA replication proteins [BR:
avg03032
]
Prokaryotic type
DNA Topoisomerases
I6H45_06505 (topA)
DNA repair and recombination proteins [BR:
avg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6H45_06505 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Auto_anti-p27
Toprim_4
HMBD
Rad50_zn_hook
Zn_ribbon_3
DNA_ligase_ZBD
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QQB61468
UniProt:
A0A7T4F031
LinkDB
All DBs
Position
complement(1339475..1341532)
Genome browser
AA seq
685 aa
AA seq
DB search
MAKNLVIVESPTKAKSITRMLGSNYKVRATYGHLRDLPKSKLGVDIEDDFEPKYIKVRGK
AKTINALKKEAESVDKVYLATDPDREGEAISWHLQYLLGLDKNELNRVEFHEITKNNVKN
AIKNPRKIDQNLVDSQQARRIMDRIVGYEISPILWKRVKSGLSAGRVQSVALKLIVDKQR
EIDSFVPKEYWTITAKHKESKIEFESEFYGSKSKKMKISNENGAEKILNRIDKDKFEVVD
IQKTKKKRKPQKPYTTSTLQQDASNKLGFSTKYTMSLAQQLFEGIDLGDKGRVGLITYMR
TDATRLSNEIIGESLSYIKEKFGEKYASKGNSYSKKSKTSQDAHEAIRPTSIYNDPISVK
EYLTDQQYKLYKLIWTRVVASQMTDYEYLSTSLSFDSNGVIFKTNGKITLFDGFMKISNA
KENENILPDLKKGDIIKALDIKKDQHFTKPPANYTEASLVKTLEEYGIGRPSTYSSTIAS
IISRNYVEFEQRKILPTKLGIRVNDFLQESFDDIINVEFTARMEDELDKIAQDEVYWKDV
LKSFYEGFEKDLKQVSKDRTDYKVKDKVLDEKCPKCGHPLAEKHGRNGKFIGCTNFPECD
FTKSIIKTTGVKCPECENGEIIEKVSKKGKRFYGCSNFPKCDYATWDPPTGEKCPKCGDL
LVHKKNRSTDEIKCNSCDYVKEKRR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttagtaattgtagaatctccaaccaaggctaagtcaatcactaggatg
ctaggttcaaattataaggttagagcaacttatggacatcttagagatttgccaaagtca
aaacttggagttgatatagaagatgattttgaaccaaaatatataaaagttcgtggaaag
gcaaaaacaatcaatgccttaaaaaaagaagcagaaagcgtagacaaagtttatcttgca
acagaccctgatagggaaggtgaggcaataagctggcatttgcaatatcttttgggactt
gataaaaatgaattgaacagagtagaatttcatgagataacaaaaaataatgtaaaaaat
gctatcaaaaatccaagaaaaatcgaccaaaatttggtagatagccaacaagcaagaaga
attatggataggatagtaggttatgaaatttctccaattttgtggaaaagagtaaaatct
ggtctatctgcaggaagagtccaatcagttgctttaaaattaattgtagataagcaaaga
gaaattgattcttttgttcctaaagaatattggacaattacagctaagcacaaagaaagt
aaaattgaatttgaatcagaattttatggatcaaaatccaaaaaaatgaaaatttcaaat
gaaaatggggcagaaaaaatcctaaataggattgataaggacaagtttgaagttgtagat
attcaaaaaacaaaaaagaaaagaaaaccacaaaagccatacacaacttcaactttacaa
caagacgcctcaaataaattaggattttcaacaaaatatacaatgtctcttgcccaacaa
ttatttgaaggaattgatttaggagataagggaagagtcggtctaattacttatatgaga
acagatgccacaagactttcaaacgaaattattggagaaagtttatcatatattaaggaa
aaatttggagaaaaatatgcatcaaaaggaaattcttattccaaaaaatcaaaaacaagt
caagatgctcacgaggcaataagacctacttcaatttacaatgatccaataagtgtaaaa
gaatatttaacagatcaacaatataaactctacaaattaatttggacaagagttgttgca
agtcagatgactgattacgaatatttgtcaacatctctttcatttgattcaaatggagta
atttttaaaacaaatggaaaaataactttgtttgatggatttatgaaaatatcaaatgca
aaagaaaatgaaaatatcctaccagatttaaaaaaaggagatattataaaggcacttgat
attaaaaaagaccaacattttactaagccaccagcaaattatactgaggcaagtcttgta
aaaactttggaagaatatggaataggaagaccatcaacttattcatcaacgatagcttca
attatttcaagaaattatgtagaatttgaacaaagaaaaattcttccgacaaaacttgga
ataagagtgaatgattttttacaagaaagttttgacgacataataaatgtagaatttact
gcaagaatggaagatgagcttgataaaattgctcaagatgaagtttattggaaagatgtt
ttaaaatctttttatgaaggatttgaaaaagatttaaaacaagtttcaaaagataggaca
gattataaggtaaaagataaagttttggatgaaaaatgtccaaagtgtggccatccgctt
gcagaaaagcacggaagaaatggaaaatttattggatgtacaaatttcccagagtgtgat
tttacaaaatcaatcataaaaacaacaggtgtaaaatgtccagaatgtgaaaatggagaa
ataatagaaaaagtttctaagaagggcaaaagattttacggctgttcaaattttccaaaa
tgtgattacgcaacatgggatccaccaacaggagaaaaatgtccaaaatgcggagacctt
ttagtccacaaaaaaaatagatcaactgatgaaataaaatgtaattcttgtgattacgtt
aaagaaaaaagaagatag
DBGET
integrated database retrieval system
