Achromobacter veterisilvae: WHX56_00445
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Entry
WHX56_00445 CDS
T10582
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
avh Achromobacter veterisilvae
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avh03000
]
WHX56_00445
Transcription factors [BR:
avh03000
]
Prokaryotic type
Helix-turn-helix
Other families
WHX56_00445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_30
HTH_23
HTH_Tnp_ISL3
AAA_5
HTH_29
HTH_50
HTH_1
PAS_4
HTH_IclR
AAA_2
AAA
AAA_16
HTH_17
HTH_28
Phage_NinH
Xre-like-HTH
HTH_24
TsaE
HTH_20
HTH_38
Motif
Other DBs
NCBI-ProteinID:
WXR73985
UniProt:
A0ABZ2S124
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All DBs
Position
105574..107439
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AA seq
621 aa
AA seq
DB search
MPNSLHSAHIREIEQVGLGRPTQRDAHVVSSWLRCLDQYRLDPAHACEAYIVPDGRLREH
RQQSEALIAIARSGLDSLFRHVAGQNYVLLLADRQGVTVEFLGDAQQTASLRKAGLYLGS
EWSERRAGTCAVGACLESGEALTIHQTDHFDNTHTPLSCTAAPIYSADGELAAVLDLSLL
SSPILKTSQNLALHLVTSTARRIEMANLMARTRNEWVLRFARSPEFLDVDPEAAISLDGS
GRILGMTHTGAKLLASAAGLDWRHPAGLIGQPVTRFFDVELDDLPRYTRAHAPQQRLIAA
RDGNALFAHAIEPNRHARGAAVAVRGLDGGDARMAALLARAAKLARQGLPILLQGETGVG
KEYLARAIHDGSRRAGRFVAVNCAAIPESLIESELFGYLPGAYTGAAAKGRKGLIEESDG
GTLFLDEIGDMPLALQSRLLRVLAESEVTPIGANAPRAVRLSLVSASHRDLAALVREGRF
REDLYYRVNAATLTVPPLRERDDLEWLIARLLARHQDDSGAPALAPAALMALKAHSWPGN
IRELANVIAVAAALCENGVIEPGDLPDALAPAAAAASPGEAALRAMLARCAGNVSEAARR
LGVDRSTVHRQMRRYGLSSRH
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgaattccctgcactccgcccatatccgcgagatcgaacaggtcggcctgggccgc
cccacccagcgcgacgcgcacgtggtgagcagttggctgcgctgcctggaccagtaccgc
ctggatcccgcgcatgcctgcgaggcctatatcgtgccggacgggcggctgcgggaacac
cgccagcaatccgaagcgctgatcgccattgcgcgctccggcctggacagcctgttccgc
cacgtcgccgggcaaaactacgtgctgctgctggccgaccgccagggcgtcaccgtggaa
ttcctgggcgacgcgcaacagaccgccagcctgcgcaaggccgggttgtacctgggatcg
gaatggtcggagcggcgcgccggcacctgcgccgtgggcgcctgcctggaaagcggcgaa
gcgctcaccatccaccagaccgaccacttcgacaacacccacacgccgctgtcctgcacc
gccgcgcccatctacagcgccgacggcgaattggcggccgttctggacctctcgctgctc
agttcccccatcctgaaaaccagccagaacctggcgctgcacctggtcaccagcaccgcg
cggcgcatcgaaatggccaacctgatggcgcgcacccgcaacgaatgggtgctgcgcttt
gcgcgttcgccggaattcctggacgtggacccagaggccgccatttcgctggacgggtcc
ggccgcatcctgggcatgacgcacacgggcgccaagctgctggccagcgccgccggcctg
gactggcgccatcccgccggcctgatcggccaacccgtcacccgtttcttcgacgtggag
ctggacgacctgccccgctacacccgcgcccacgcgccgcagcagcgcctgatcgccgcg
cgcgacggcaacgccctgttcgcgcacgccatcgaacccaaccggcacgcccggggcgcg
gccgtcgcggtgcgcggtctggacggcggcgacgccaggatggccgccctgctggcgcgc
gccgccaagctggccaggcagggcctgcccatcctgctgcaaggcgaaaccggcgtgggc
aaggaatacctggcccgcgccatccatgacggcagccggcgcgcgggccgtttcgtcgcc
gtgaactgcgcggcgatcccggaatccctgatcgaaagcgaactgttcggctacctgccg
ggggcctacaccggcgcggcggcgaagggccgcaagggcctgatcgaggaatccgacggc
ggaaccctgttcctggacgaaatcggcgacatgccgctggcgttgcaaagccggctgctg
cgcgtcctggccgaatccgaggtcactcccatcggcgccaacgcgccgcgcgcggtgcgc
ctgagcctcgtgtcggcctcgcaccgcgacctggcggcgctggtgcgcgagggacgcttc
cgcgaagacctctactaccgcgtcaacgccgcgacgctgaccgtgccgccgctgcgcgag
cgcgacgacctggagtggctgatcgcccgcctgctggcgcgccaccaggacgactcgggc
gccccggcgctggcgcccgccgcgctgatggcgctgaaagcccattcctggcccggcaac
atccgcgagcttgccaatgtcatcgcggtggcggccgcgctgtgcgaaaacggcgtcatc
gaacccggcgacctgcccgacgcgctggcgccggcggcggcagccgccagccccggagaa
gccgccttgcgcgccatgctggcgcgttgcgccggcaacgtgtccgaagccgcccggcgc
ctgggcgtggaccgctccaccgtccatcgccagatgcggcgctacggcctctcctcgcgc
cactga
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