Achromobacter veterisilvae: WHX56_01730
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Entry
WHX56_01730 CDS
T10582
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
avh Achromobacter veterisilvae
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avh03000
]
WHX56_01730
Transcription factors [BR:
avh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
WHX56_01730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
DUF2336
Phage_T7_Capsid
Motif
Other DBs
NCBI-ProteinID:
WXR74231
LinkDB
All DBs
Position
385667..386569
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AA seq
300 aa
AA seq
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MNLSTRQLRAFVSAADHQNFTRAAAEIGLSQPAFSALIKSLEEELGAQLFVRNTRNIELS
AFGKLFESFARRSLYETDTALQHLQDYAAGRIGTVQVAALPSVAASWLPPVFRQFRAQYP
GVTTVLRDGMSQECVELLSNGEIDFAIATVDHYAAKLERQLLWQDQLHLICPPDHPLARQ
RKRVTLEQIAQYPIVNFVSHSSVRQRVDAAFGPHTLNTVLEVEHLATASAMVESGVGLTI
VPTLTLYQFRRPTLTIRAIEDNSFKREVFVLTRKNRQLSRPARAMFDMVTAHVAGLKHDG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctccacccgccagctccgcgccttcgtcagcgccgccgatcaccagaacttc
acccgcgcggcggccgaaatcggcctgtcgcagccggcgttcagcgcattgatcaagtcg
ttggaagaagaactgggcgcgcagctcttcgtgcgcaacacccgcaatatcgaactgtcc
gccttcggcaagctgttcgagtcctttgcgcggcgttccctgtatgaaaccgacaccgcg
ctgcaacatctacaggactacgcggcggggcgcatcggaacagtacaggtcgccgccctg
ccctcggtggcggccagttggctgccgcccgtcttccggcaattccgcgcccaatacccg
ggcgtgaccaccgtcctgcgcgacggcatgtcgcaagaatgcgtggaattgctcagcaat
ggcgagatcgacttcgccatcgccactgtcgaccactatgccgccaagctcgaacgccag
ctcctgtggcaggatcaactgcacctcatctgcccgcccgaccatcccctggcccgccag
cgcaagcgcgtgaccctggagcagatcgcccagtaccccatcgtcaactttgtcagccac
agcagcgtgcgccagcgcgtggacgccgccttcggaccccatacgctcaataccgtcctg
gaggtcgaacatctggccaccgccagcgccatggtcgaaagcggcgtgggcctgaccatc
gtccccacgctcacgctctaccagttccggcgccccaccctcaccatccgcgccatcgaa
gacaatagcttcaagcgggaggtcttcgtcctcacccgaaagaacagacagctctcgcgt
ccggcccgagcgatgttcgacatggtgacggcccacgtagccgggctgaagcatgacggc
tga
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